Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PuuR regulog to Fervidobacterium nodosum Rt17-B1

Reference regulog properties
Source regulog: PuuR - Thermotogales
Regulator type: Transcription factor
Regulator family: XRE
Regulation mode:
Biological process: Spermidine biosynthesis
Effector: Putrescine
Phylum: Thermotogae
Propagated regulon:
Target genome Fervidobacterium nodosum Rt17-B1
Orthologous TF(s) Fnod_1325
Regulated genes 1
Built upon 16 sites [see more]
Predicted regulatory interactions in Fervidobacterium nodosum Rt17-B1
Locus tag Position Score Sequence
Position: -134
Score: 4.9
Sequence: TTGTTCACTTAAGTAAACAT
Locus tag: Fnod_1327
Fnod_1327 -134 4.9 TTGTTCACTTAAGTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: speD
Ortholog function: S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B
Fervidobacterium nodosum Rt17-B1 Fnod_1327 -134 4.9 TTGTTCACTTAAGTAAACAT
Thermosipho africanus TCF52B THA_1404 -59 4.5 ATGTTCTGTATCATAGACAT
-36 5.6 TTGTTCAGTATTATAGACAT
Thermosipho melanesiensis BI429 Tmel_0571 -32 5.5 TTGTTTAGTATTATAGACAT
Thermotoga lettingae TMO Tlet_0753 -220 5.2 TTGTTGAGGATAATTGACAA
-62 5.5 GTGATCAATATACTGGACAA
Thermotoga maritima MSB8 TM0655 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA
Thermotoga naphthophila RKU-10 Tnap_0451 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA
Thermotoga neapolitana DSM 4359 CTN_0002 -22 4.8 ATGTCTGTGATACTGAACAA
0 6.4 TTGTCAACTATAGTGGTCAA
Thermotoga petrophila RKU-1 Tpet_0276 -22 4.8 ATGTCTGTGATACTGAACAA
0 6.8 TTGTCAACTATAGTGGACAA
Thermotoga sp. RQ2 TRQ2_0274 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA