Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex1 regulog to Fervidobacterium nodosum Rt17-B1

Reference regulog properties
Source regulog: Rex1 - Thermotogales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Propagated regulon:
Target genome Fervidobacterium nodosum Rt17-B1
Orthologous TF(s) Fnod_0224
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Fervidobacterium nodosum Rt17-B1
Locus tag Position Score Sequence
Position: -125
Score: 5.8
Sequence: TTGTGAAAAAAATAACGT
Locus tag: Fnod_0227
Fnod_0227 -125 5.8 TTGTGAAAAAAATAACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hydC
Ortholog function: Fe-hydrogenase, gamma subunit, FeS cluster containing
Fervidobacterium nodosum Rt17-B1 Fnod_0227 -125 5.8 TTGTGAAAAAAATAACGT
Thermosipho africanus TCF52B THA_785 -49 5 TCGTGAAAATAATAACGT
Thermosipho melanesiensis BI429 Tmel_0492 -43 5.1 TCGTGAAAAATATAACGT
Thermotoga lettingae TMO Tlet_0954 32 6.1 TCGTGAAATAAATAACGA
Thermotoga maritima MSB8 TM1424 -95 6.6 TTGTGAAGTAGGTAACAA
Thermotoga neapolitana DSM 4359 CTN_1069 -101 5.9 TTGTGAATACAGTAACAA
Thermotoga petrophila RKU-1 Tpet_1369 -119 6.6 TTGTGAAGTAGGTAACAA
Thermotoga sp. RQ2 TRQ2_1317 -101 6.6 TTGTGAAGTAGGTAACAA
Position: -52
Score: 6
Sequence: TCGTGAAATAATTAACGA
Locus tag: Fnod_0319
Fnod_0319 -52 6 TCGTGAAATAATTAACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: TM1420
Ortholog function: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Fervidobacterium nodosum Rt17-B1 Fnod_0319 -52 6 TCGTGAAATAATTAACGA
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