Propagation of TreR regulog to Fervidobacterium nodosum Rt17-B1
| Source regulog: | TreR - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Fervidobacterium nodosum Rt17-B1 |
| Orthologous TF(s) | Fnod_0452 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -248
Score: 5.9 Sequence: ATATATTCGAATTTCGAATATAT
Locus tag: Fnod_0450
|
||||
| Fnod_0450 | -248 | 5.9 | ATATATTCGAATTTCGAATATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treE | ||||
| Ortholog function: Trehalose ABC transporter, substrate-binding component | ||||
| Thermotoga sp. RQ2 | TRQ2_0970 | -139 | 5.9 | TTATTTTCATTTAACGAAAAAAA |
| Thermotoga neapolitana DSM 4359 | CTN_0780 | -478 | 5.9 | tTaTtTTCATTTAACGAAaAAAa |
| Thermotoga petrophila RKU-1 | Tpet_0954 | -143 | 5.9 | TTATTTTCATTTAACGAAAAAAA |
| Thermotoga naphthophila RKU-10 | Tnap_0600 | -143 | 5.9 | TTATTTTCATTTAACGAAAAAAA |
| Thermosipho africanus TCF52B | THA_844 | -327 | 5.9 | TTTAATTCGAATTTCGAAAAAAT |
| -56 | 5.9 | ATAAATTCGAAAATCGAAAAAAT | ||
| Thermosipho melanesiensis BI429 | Tmel_1820 | -316 | 5.6 | ATTTTTTTGAATTTCGAAATAAT |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0450 | -248 | 5.9 | ATATATTCGAATTTCGAATATAT |
|
Position: -127
Score: 5.9 Sequence: ATATATTCGAAATTCGAATATAT
Locus tag: Fnod_0451
|
||||
| Fnod_0451 | -127 | 5.9 | ATATATTCGAAATTCGAATATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treT | ||||
| Ortholog function: Trehalose synthase, nucleoside diphosphate glucose dependent | ||||
| Thermotoga maritima MSB8 | TM0392 | -38 | 6.1 | ATTAATTCAAGTTACGAATAAAT |
| Thermotoga sp. RQ2 | TRQ2_0542 | -38 | 6.1 | ATTAATTCAAGTTACGAATAAAT |
| Thermotoga neapolitana DSM 4359 | CTN_0277 | -37 | 6.1 | ATTAATTCAAGTTACGAATAAAT |
| Thermotoga petrophila RKU-1 | Tpet_0528 | -38 | 6.1 | ATTAATTCAAGTTACGAATAAAT |
| Thermotoga naphthophila RKU-10 | Tnap_0184 | -38 | 6.1 | ATTAATTCAAGTTACGAATAAAT |
| Thermotoga lettingae TMO | Tlet_1841 | -8 | 5.7 | ATTAATTCATGTTACGACAAAAT |
| Thermosipho africanus TCF52B | THA_843 | -35 | 5.9 | ATTTTTTCGAAATTCGAATTAAA |
| Thermosipho melanesiensis BI429 | Tmel_1821 | -38 | 5.6 | ATTATTTCGAAATTCAAAAAAAT |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0451 | -127 | 5.9 | ATATATTCGAAATTCGAATATAT |