Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrdR regulog to Fervidobacterium nodosum Rt17-B1

Reference regulog properties
Source regulog: NrdR - Thermotogales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Thermotogae
Propagated regulon:
Target genome Fervidobacterium nodosum Rt17-B1
Orthologous TF(s) Fnod_1156
Regulated genes 1
Built upon 60 sites [see more]
Predicted regulatory interactions in Fervidobacterium nodosum Rt17-B1
Locus tag Position Score Sequence
Position: -98
Score: 5.1
Sequence: ATACTATATATGGTAT
Locus tag: Fnod_0421
Fnod_0421 -98 5.1 ATACTATATATGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdJ
Ortholog function: B12-dependent ribonucleotide reductase (EC 1.17.4.1)
Thermotoga maritima MSB8 TM0118 -64 4.5 CTACCACATGTTGAAT
-34 5.3 ACACAATATGTTGTTT
Thermotoga sp. RQ2 TRQ2_0829 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga neapolitana DSM 4359 CTN_0571 -37 4.4 CCACCACATGTTGAAT
-7 5 AcACAATATgTTGTta
Thermotoga petrophila RKU-1 Tpet_0806 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga naphthophila RKU-10 Tnap_0748 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga lettingae TMO Tlet_0333 -75 5.4 ACACAATATATAGTGT
-45 4.7 ATACAACTTGTAGTAT
Thermosipho africanus TCF52B THA_675 -91 5.3 AAACTATATATTGTAT
-59 5.5 ATACAATATATTGTGG
Thermosipho melanesiensis BI429 Tmel_0606 -103 5.4 ACACAATATATAGTAT
-71 5.5 ATACAATATATTGTGG
Fervidobacterium nodosum Rt17-B1 Fnod_0421 -128 4.5 TAACTATAAGTTGTGT
-98 5.1 ATACTATATATGGTAT
Petrotoga mobilis SJ95 Pmob_1872 -63 4.6 TTTCAATATATTGTCG
-32 4.9 GTACAATATATTGATT
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