Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR regulog to Fervidobacterium nodosum Rt17-B1

Reference regulog properties
Source regulog: GalR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector: Galactose
Phylum: Thermotogae
Propagated regulon:
Target genome Fervidobacterium nodosum Rt17-B1
Orthologous TF(s) Fnod_0418
Regulated genes 2
Built upon 19 sites [see more]
Predicted regulatory interactions in Fervidobacterium nodosum Rt17-B1
Locus tag Position Score Sequence
Position: -43
Score: 5
Sequence: CCGGTAACGTTACCAA
Locus tag: Fnod_0419
Fnod_0419 -43 5 CCGGTAACGTTACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacA
Ortholog function: Beta-galactosidase (EC 3.2.1.23), LacA family
Fervidobacterium nodosum Rt17-B1 Fnod_0419 -43 5 CCGGTAACGTTACCAA
Position: -69
Score: 4.7
Sequence: TCGGTTACGTTACCGG
Locus tag: Fnod_0626
Fnod_0626 -69 4.7 TCGGTTACGTTACCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: galX
Ortholog function: Predicted galactoside ABC transporter type II, sugar-binding protein
Thermotoga neapolitana DSM 4359 CTN_1372 -63 5 CTGTGAACGTTCACGG
-62 5.6 ACGGTAACGTTTACGT
8 4.9 ACATAAACGTTCACGG
Thermotoga lettingae TMO Tlet_1127 -41 5.4 TCGGTAACGTTACCGT
Fervidobacterium nodosum Rt17-B1 Fnod_0626 -69 4.7 TCGGTTACGTTACCGG