Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Petrotoga mobilis SJ95

Reference regulog properties
Source regulog: Rex - Thermotogales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Propagated regulon:
Target genome Petrotoga mobilis SJ95
Orthologous TF(s) Pmob_0343
Regulated genes 5
Built upon 114 sites [see more]
Predicted regulatory interactions in Petrotoga mobilis SJ95
Locus tag Position Score Sequence
Position: -58
Score: 5
Sequence: TAGTGAATTTTTTAACTT
Locus tag: Pmob_0726
Pmob_0726 -58 5 TAGTGAATTTTTTAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hycA
Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2)
Thermotoga maritima MSB8 TM0012 -27 4.3 aTGTGAAAAaaaTatCAg
-2 5 TTGTGAAAAaaTTCcCgA
Thermotoga sp. RQ2 TRQ2_0933 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga neapolitana DSM 4359 CTN_0686 -61 4.3 ATGTGAAAAAAATATCAG
-36 5.2 TTGTGAAAAAATTCTCGA
Thermotoga petrophila RKU-1 Tpet_0911 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga naphthophila RKU-10 Tnap_0643 -69 4.3 ATGTGAAAAAAATATCAG
-44 5 TTGTGAAAAAATTCCCGA
Thermotoga lettingae TMO Tlet_1522 -30 4.8 TTGTGAATTTATTAACAG
Thermosipho africanus TCF52B THA_782 -49 4.9 TcGTGAAAATaaTaACgt
-35 5 acGTtAtAtTTTTCACgA
Thermosipho africanus TCF52B THA_1559 -65 4.6 aaGTGAAAtTTTTtACtt
12 4.2 TTGTGAAAAacaTgtCgA
Thermosipho melanesiensis BI429 Tmel_1172 -68 4.5 aaGTGAAttTTTTtACtt
9 4.2 TTGTGAAAAacaTgtCgA
Fervidobacterium nodosum Rt17-B1 Fnod_0995 -38 4.8 ATGTTATAATAATCACGA
Petrotoga mobilis SJ95 Pmob_0726 -133 5.3 ATGTGAATATTTTCACAA
Thermotogales bacterium TBF 19.5.1 Kole_0180 -71 4.6 aaGTGAAAtaaaTaACAt
Position: -133
Score: 5.3
Sequence: ATGTGAATATTTTCACAA
Locus tag: Pmob_0728
Pmob_0728 -133 5.3 ATGTGAATATTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pmob_0727
Ortholog function: oxidoreductase domain protein
Petrotoga mobilis SJ95 Pmob_0728 -133 5.3 ATGTGAATATTTTCACAA
Petrotoga mobilis SJ95 Pmob_0727 -133 5.3 ATGTGAATATTTTCACAA
Position: -36
Score: 5.4
Sequence: TAGTGAAAATATTAACAA
Locus tag: Pmob_1151
Pmob_1151 -36 5.4 TAGTGAAAATATTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hycE
Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycE (EC 1.12.7.2)
Thermotoga sp. RQ2 TRQ2_0721 -30 5.3 TTGTGAAATTTTTGACGA
Thermotoga neapolitana DSM 4359 CTN_0459 8 5.3 TTGTGAAATTTTTGACGA
Thermotoga petrophila RKU-1 Tpet_0697 -30 5.3 TTGTGAAATTTTTGACGA
Thermotoga naphthophila RKU-10 Tnap_0857 -30 5.3 TTGTGAAATTTTTGACGA
Thermotoga lettingae TMO Tlet_1519 -30 4.8 TTGTGAATTTATTAACAG
Thermosipho melanesiensis BI429 Tmel_1169 -68 4.5 aaGTGAAttTTTTtACtt
9 4.2 TTGTGAAAAacaTgtCgA
Fervidobacterium nodosum Rt17-B1 Fnod_0992 -38 4.8 ATGTTATAATAATCACGA
Petrotoga mobilis SJ95 Pmob_1151 -36 5.4 TAGTGAAAATATTAACAA
Thermotogales bacterium TBF 19.5.1 Kole_0183 -71 4.6 aaGTGAAAtaaaTaACAt
Position: -44
Score: 4.6
Sequence: AAGAGAAAAAAATAACAA
Locus tag: Pmob_1445
Pmob_1445 -44 4.6 AAGAGAAAAAAATAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gap
Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
Thermotoga maritima MSB8 TM0688 -104 5.1 TaGTtAtttTTTTCACgA
Thermotoga neapolitana DSM 4359 CTN_1898 -103 5.1 TAGTTATTTTTTTCACGA
Thermotoga petrophila RKU-1 Tpet_0243 -104 5.1 TAGTTATTTTTTTCACGA
Thermotoga naphthophila RKU-10 Tnap_0484 -104 5.1 TAGTTATTTTTTTCACGA
Thermotoga lettingae TMO Tlet_0998 -29 4 cTGTtAtAATTTaatCAA
Thermosipho africanus TCF52B THA_1607 -44 5.2 TaGTaAAAtTTTTCACgA
Thermosipho melanesiensis BI429 Tmel_1266 -45 5.2 TaGTaAAAtTTTTCACgA
Fervidobacterium nodosum Rt17-B1 Fnod_0740 -77 4.7 TTGTacAAtTTTTCACgA
Petrotoga mobilis SJ95 Pmob_1445 -43 4.6 aaGaGAAAAaaaTaACAA
Thermotogales bacterium TBF 19.5.1 Kole_2020 -90 5.4 TaGTtAAtAaTTTCACAA
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