Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Petrotoga mobilis SJ95

Reference regulog properties
Source regulog: NrdR - Thermotogales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Thermotogae
Propagated regulon:
Target genome Petrotoga mobilis SJ95
Orthologous TF(s) Pmob_0157
Regulated genes 3
Built upon 60 sites [see more]
Predicted regulatory interactions in Petrotoga mobilis SJ95
Locus tag Position Score Sequence
Position: -62
Score: 5
Sequence: ACACAATAAATTGAGT
Locus tag: Pmob_0978
Pmob_0978 -62 5 ACACAATAAATTGAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Anaerobic ribonucleoside-triphosphate reductase (EC 1.17.4.2)
Petrotoga mobilis SJ95 Pmob_0978 -94 4.6 ATACAATATACAGTGG
-62 5 ACACAATAAATTGAGT
Position: -32
Score: 4.9
Sequence: GTACAATATATTGATT
Locus tag: Pmob_1872
Pmob_1872 -32 4.9 GTACAATATATTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdJ
Ortholog function: B12-dependent ribonucleotide reductase (EC 1.17.4.1)
Thermotoga maritima MSB8 TM0118 -64 4.5 CTACCACATGTTGAAT
-34 5.3 ACACAATATGTTGTTT
Thermotoga sp. RQ2 TRQ2_0829 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga neapolitana DSM 4359 CTN_0571 -37 4.4 CCACCACATGTTGAAT
-7 5 AcACAATATgTTGTta
Thermotoga petrophila RKU-1 Tpet_0806 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga naphthophila RKU-10 Tnap_0748 -64 4.3 CTACCAAATGTTGAAT
-34 5 ACACAATATGTTGTTA
Thermotoga lettingae TMO Tlet_0333 -75 5.4 ACACAATATATAGTGT
-45 4.7 ATACAACTTGTAGTAT
Thermosipho africanus TCF52B THA_675 -91 5.3 AAACTATATATTGTAT
-59 5.5 ATACAATATATTGTGG
Thermosipho melanesiensis BI429 Tmel_0606 -103 5.4 ACACAATATATAGTAT
-71 5.5 ATACAATATATTGTGG
Fervidobacterium nodosum Rt17-B1 Fnod_0421 -128 4.5 TAACTATAAGTTGTGT
-98 5.1 ATACTATATATGGTAT
Petrotoga mobilis SJ95 Pmob_1872 -63 4.6 TTTCAATATATTGTCG
-32 4.9 GTACAATATATTGATT