Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YrkD regulog to Geobacillus thermodenitrificans NG80-2

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus thermodenitrificans NG80-2
Orthologous TF(s) GTNG_1984
Regulated genes 3
Built upon 39 sites [see more]
Predicted regulatory interactions in Geobacillus thermodenitrificans NG80-2
Locus tag Position Score Sequence
Position: -22
Score: 4.7
Sequence: ATACACTAGGGGGTAT
Locus tag: GTNG_1978
GTNG_1978 -22 4.7 ATACACTAGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkH
Ortholog function: Zn-dependent hydroxyacylglutathione hydrolase / Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2342 -36 4.9 ATACCCTATAAGGTAT
Geobacillus kaustophilus HTA426 GK2065 -22 4.6 ATACATTAGGGGGTAT
Position: -33
Score: 5.8
Sequence: ATACCCGTATAGGTAT
Locus tag: GTNG_1982
GTNG_1982 -33 5.8 ATACCCGTATAGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkE
Ortholog function: Putative sulfur reduction protein
Bacillus amyloliquefaciens FZB42 RBAM_005430 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0798 -32 5.4 ATACCCCTATAGGTAA
Bacillus licheniformis DSM 13 BLi02794 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0190 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26540 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2069 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2652 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -15
Score: 5.4
Sequence: ATACCTATAGGGGTAA
Locus tag: GTNG_1983
GTNG_1983 -15 5.4 ATACCTATAGGGGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkI
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2345 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Geobacillus kaustophilus HTA426 GK2070 -52 5.6 ATACCCATAGGGGTAA
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