Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Reference regulog properties
Source regulog: Rex - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Orthologous TF(s) SSP0833
Regulated genes 6
Built upon 74 sites [see more]
Predicted regulatory interactions in Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Locus tag Position Score Sequence
Position: -107
Score: 6.1
Sequence: TTGTGAAATTAATCACAA
Locus tag: SSP0417
SSP0417 -107 6.1 TTGTGAAATTAATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2268
Ortholog function: conserved hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2268 -129 5.7 TTGTGAAATACATCACAA
Staphylococcus capitis SK14 STACA0001_1015 -94 5.7 TTGTGAAAAGTATCACAA
Staphylococcus epidermidis ATCC 12228 SE2038 -91 5.7 TTGTGAAATGTATCACAA
Staphylococcus haemolyticus JCSC1435 SH0583 -87 5.7 TTGTGAAAAGTATCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0417 -107 6.1 TTGTGAAATTAATCACAA
Position: -76
Score: 6.3
Sequence: TTGTGAAAAAATTCACAA
Locus tag: SSP0537
SSP0537 -76 6.3 TTGTGAAAAAATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lctP
Ortholog function: L-lactate permease
Staphylococcus aureus subsp. aureus N315 SA2156 -124 6 TTGTGAAAAAAATCACAT
Staphylococcus capitis SK14 STACA0001_1119 -129 5.9 TTGTGAAAAAGTTCACAA
Staphylococcus haemolyticus JCSC1435 SH0691 -161 5.9 TTGTGAAAAAGTTCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0537 -76 6.3 TTGTGAAAAAATTCACAA
Position: -71
Score: 6.2
Sequence: TTGTGAAAATATTCACAA
Locus tag: SSP0590
SSP0590 -71 6.2 TTGTGAAAATATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirC
Ortholog function: Formate/nitrite family of transporters
Staphylococcus aureus subsp. aureus N315 SA0293 -72 6.2 TTGTGAAATTATTCACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1814 -75 5.9 TTGTGAAAGTATTCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0590 -71 6.2 TTGTGAAAATATTCACAA
Position: -113
Score: 6.1
Sequence: TTGTGAAATAAATCACAA
Position: -55
Score: 6.1
Sequence: TTGTGAAATAAATCACAA
Locus tag: SSP1001
SSP1001 -113 6.1 TTGTGAAATAAATCACAA
-55 6.1 TTGTGAAATAAATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC:1.1.1.27)
Staphylococcus aureus subsp. aureus N315 SA0232 -227 6 ATGTGAAATAAATCACAA
-169 6 ATGTGAAATAAATCACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1369 -55 5.5 ATGTGAAATAAATCATAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1001 -113 6.1 TTGTGAAATAAATCACAA
-55 6.1 TTGTGAAATAAATCACAA
Macrococcus caseolyticus JCSC5402 MCCL_0163 -142 6.1 TTGTGAAAATAATCACAA
Position: -105
Score: 5.1
Sequence: ATGATAATTTTTTCACAA
Locus tag: SSP1260
SSP1260 -105 5.1 ATGATAATTTTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: srrA
Ortholog function: Staphylococcal respiratory response protein SrrA
Staphylococcus aureus subsp. aureus N315 SA1323 -103 5.6 TTGAGAATTTTTTCACAA
Staphylococcus capitis SK14 STACA0001_1733 -106 5.2 TTGAGATTTTTTTCACAT
Staphylococcus epidermidis ATCC 12228 SE1176 -104 4.9 TTGATATTTTTTTCACAA
Staphylococcus haemolyticus JCSC1435 SH1424 -101 4.8 TTGCTATTTTTTTCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1260 -105 5.1 ATGATAATTTTTTCACAA
Position: -99
Score: 5.9
Sequence: TTGTGAATTTTATCACAA
Locus tag: SSP1728
SSP1728 -99 5.9 TTGTGAATTTTATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmp
Ortholog function: Nitric oxide dioxygenase (EC 1.14.12.17)
Staphylococcus haemolyticus JCSC1435 SH1899 -98 5.7 TTGTGAATTTAATTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1728 -99 5.9 TTGTGAATTTTATCACAA
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