Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Reference regulog properties
Source regulog: ArgR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor
Biological process: Arginine biosynthesis; Arginine degradation
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Orthologous TF(s) SSP1234
Regulated genes 9
Built upon 65 sites [see more]
Predicted regulatory interactions in Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Locus tag Position Score Sequence
Position: -295
Score: 4.6
Sequence: ACAAATATTTATACGT
Position: -274
Score: 4.9
Sequence: ATGAATAAAGATACAT
Position: -167
Score: 4.9
Sequence: TTATATAAATATTCAT
Locus tag: SSP0193
SSP0193 -295 4.6 ACAAATATTTATACGT
-274 4.9 ATGAATAAAGATACAT
-167 4.9 TTATATAAATATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cudT
Ortholog function: choline transporter
Staphylococcus aureus subsp. aureus N315 SA2408 -288 4.8 ATAAATAAATATTCGT
-267 4.8 ACGTATAAATATTCTT
-157 4.6 TTATATAAATATTCAA
-112 4.2 TTGCATTATTATTAAA
Staphylococcus epidermidis ATCC 12228 SE2168 -148 4.7 TTATATAATTATTCAA
-103 4.2 TTGCATTATTATTAAA
-26 3.7 ATAAATTAATATTAGG
Staphylococcus carnosus subsp. carnosus TM300 Sca_2165 -282 4.9 AAGAATAATTATACAA
-176 5.1 ATATATATTTATTCAT
-132 4.5 TTGCATTATTATAAAT
Staphylococcus haemolyticus JCSC1435 SH0426 -261 4.7 ATAAATATAAATTCAT
-133 4.9 ATATATATTTATTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0193 -274 4.9 ATGAATAAAGATACAT
-167 4.9 TTATATAAATATTCAT
-32 4.2 AGTTATAAAAATAAAT
Position: -54
Score: 4.5
Sequence: ATTTATGAATATTAAT
Position: -50
Score: 5.2
Sequence: ATGAATATTAATTCAT
Locus tag: SSP0220
SSP0220 -54 4.5 ATTTATGAATATTAAT
-50 5.2 ATGAATATTAATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocD
Ortholog function: ornithine aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0179 -51 4.6 ATATATTAATATTAAT
-47 4.5 ATTAATATTAATTCTT
-27 4.4 TTGTATAAATATAAAG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0220 -105 3.8 AAGTGTAAAAATTCAA
-54 4.5 ATTTATGAATATTAAT
-50 5.2 ATGAATATTAATTCAT
Position: -165
Score: 4.1
Sequence: ATGTATATAAAATTAA
Position: -154
Score: 4.5
Sequence: ATTAAATAATATTCAT
Position: -140
Score: 3.9
Sequence: ATTTTTTAGTATAAAT
Position: -134
Score: 4.3
Sequence: TAGTATAAATATACTT
Position: -97
Score: 3.7
Sequence: TATTATGTATATAAAT
Locus tag: SSP0232
SSP0232 -165 4.1 ATGTATATAAAATTAA
-154 4.5 ATTAAATAATATTCAT
-140 3.9 ATTTTTTAGTATAAAT
-134 4.3 TAGTATAAATATACTT
-97 3.7 TATTATGTATATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcB
Ortholog function: ornithine carbamoyltransferase
Staphylococcus aureus subsp. aureus N315 SA2427 -142 4.9 ATGTATAAAAATCCAT
Staphylococcus capitis SK14 STACA0001_1844 -243 4.1 TTGACTAACTATTCAT
-140 4.6 ATGTATAAACAATCAT
Staphylococcus epidermidis ATCC 12228 SE2216 -267 3.8 TTCAATAAATATGAGT
Position: -37
Score: 4.8
Sequence: ATGTATAATAATGAAT
Locus tag: SSP0936
SSP0936 -37 4.8 ATGTATAATAATGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artPQ
Ortholog function: Arginine ABC transporter, substrate-binding and permease protein
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0936 -57 4.2 TTGAATATTATTTCGT
-37 4.8 ATGTATAATAATGAAT
Position: -33
Score: 5.3
Sequence: ATGTATAAATATTCGT
Locus tag: SSP1234
SSP1234 -33 5.3 ATGTATAAATATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahrC
Ortholog function: arginine repressor
Staphylococcus aureus subsp. aureus N315 SA1351 -47 4.1 ATGTGTTAAAATAAAT
-33 5.3 ATGTATAAATATTCGT
Staphylococcus capitis SK14 STACA0001_1758 -33 5 TTGTATAAATATTCGT
Staphylococcus epidermidis ATCC 12228 SE1201 -38 3.7 ATGTGTTAAAATCAAT
-24 5.3 ATGTATAAATATTCGT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1144 -34 5.3 ATGTATAAATATTCGT
Staphylococcus haemolyticus JCSC1435 SH1395 -33 4.8 TTGTATAATTATTCGA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1234 -33 5.3 ATGTATAAATATTCGT
Macrococcus caseolyticus JCSC5402 MCCL_1165 -29 4.6 ATGTATAAATATGCAC
Position: -109
Score: 4.5
Sequence: ATGCATATTTATGTAT
Position: -85
Score: 4.3
Sequence: TTTTATTTTCATTCAT
Locus tag: SSP1814
SSP1814 -109 4.5 ATGCATATTTATGTAT
-85 4.3 TTTTATTTTCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -97 4.5 ATGAATAAATATGTAA
Staphylococcus capitis SK14 STACA0001_0165 -98 4.3 tTGaATAtTTATgtAa
Staphylococcus epidermidis ATCC 12228 SE0657 -96 4.5 ATGAATATTTATGTAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -99 4.3 TTGTATATTTATGTAA
Staphylococcus haemolyticus JCSC1435 SH1989 -95 4.3 TTGTATATTTATGTAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1814 -110 4.5 ATGcATAtTTATgtAT
Macrococcus caseolyticus JCSC5402 MCCL_0587 -96 5.1 ATGAATAATTATACTT
-50 5 ATGTATATTAATTAAT