Propagation of Rex regulog to Staphylococcus lugdunensis HKU09-01
| Source regulog: | Rex - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus lugdunensis HKU09-01 |
| Orthologous TF(s) | SLGD_00976 |
| Regulated genes | 12 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -73
Score: 6 Sequence: ATGTGAAAAAAATCACAA
Locus tag: SLGD_00171
|
||||
| SLGD_00171 | -73 | 6 | ATGTGAAAAAAATCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pflB | ||||
| Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54) | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0218 | -96 | 6 | ATGTGAAAAAAATCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE0214 | -74 | 5.8 | ATGTGAAATTAATCACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2017 | -93 | 5.3 | AAGTGATTTTTTTCACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0434 | -74 | 4.7 | TTGTGATACTTTTCACGT |
|
Position: -38
Score: 5.4 Sequence: TTGTGAGAATTTTCACAT
Locus tag: SLGD_00455
|
||||
| SLGD_00455 | -38 | 5.4 | TTGTGAGAATTTTCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhB | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent | ||||
| Staphylococcus capitis SK14 | STACA0001_0960 | -36 | 6.2 | TTGTGAAAATATTCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE2098 | -37 | 5.4 | TTGCGAAAAATTTCACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0522 | -38 | 6.1 | TTGTGAAAATATTCACAT |
|
Position: -150
Score: 6.3 Sequence: TTGTGAAATAATTCACAA
Locus tag: SLGD_00476
|
||||
| SLGD_00476 | -150 | 6.3 | TTGTGAAATAATTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ddh | ||||
| Ortholog function: D-lactate dehydrogenase (EC 1.1.1.28) | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2312 | -39 | 5.9 | TTGTGATATTTTTCACAA |
| Staphylococcus capitis SK14 | STACA0001_0984 | -119 | 5.8 | TTGTGAAAACTTTCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE2074 | -100 | 5.5 | TAGTGAATTAAATCACAT |
| -56 | 4.9 | TTGTGAATGTTTTTACTA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2121 | -81 | 6 | TTGTGAATATATTCACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0545 | -203 | 5.5 | ATGTGAATTTTTTAACAA |
| -154 | 6.2 | TTGTGAATAAATTCACAA | ||
|
Position: -221
Score: 6.1 Sequence: TTGTGAATTATTTCACAA
Locus tag: SLGD_00477
|
||||
| SLGD_00477 | -221 | 6.1 | TTGTGAATTATTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: frp | ||||
| Ortholog function: NAD(P)H-flavin oxidoreductase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2311 | -185 | 6 | TTGTGAAAAATATCACAA |
| Staphylococcus capitis SK14 | STACA0001_0985 | -197 | 5.8 | TTGTGAAAGTTTTCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE2073 | -208 | 4.9 | TAGTAAAAACATTCACAA |
| -164 | 5.3 | ATGTGATTTAATTCACTA | ||
| Staphylococcus haemolyticus JCSC1435 | SH0546 | -182 | 6.2 | TTGTGAATTTATTCACAA |
| -133 | 5.6 | TTGTTAAAAAATTCACAT | ||
|
Position: -88
Score: 5.6 Sequence: TTGTGAAATACATCACAT
Locus tag: SLGD_00514
|
||||
| SLGD_00514 | -88 | 5.6 | TTGTGAAATACATCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2268 | ||||
| Ortholog function: conserved hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2268 | -129 | 5.7 | TTGTGAAATACATCACAA |
| Staphylococcus capitis SK14 | STACA0001_1015 | -94 | 5.7 | TTGTGAAAAGTATCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE2038 | -91 | 5.7 | TTGTGAAATGTATCACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0583 | -87 | 5.7 | TTGTGAAAAGTATCACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0417 | -107 | 6.1 | TTGTGAAATTAATCACAA |
|
Position: -144
Score: 5.9 Sequence: TTGTGATTTTATTCACAA
Locus tag: SLGD_00594
|
||||
| SLGD_00594 | -144 | 5.9 | TTGTGATTTTATTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nasD | ||||
| Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2188 | -64 | 5.3 | ATGTGATTCTTTTCACAA |
| Staphylococcus capitis SK14 | STACA0001_1077 | -64 | 6 | ATGTGAATAAAATCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE1978 | -145 | 5.6 | ATGTGAATTACATCACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1897 | -64 | 5.7 | TTGTGAATACATTCACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0651 | -141 | 5.6 | TTGTGAAAATCATCACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1340 | -91 | 5.8 | ATGTGAACATATTCACAA |
|
Position: -88
Score: 5.4 Sequence: TTGTGAAAAAATATACAA
Locus tag: SLGD_00597
|
||||
| SLGD_00597 | -88 | 5.4 | TTGTGAAAAAATATACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narG | ||||
| Ortholog function: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2185 | -107 | 5.5 | TTGTGAAAAAATGTACAA |
| Staphylococcus capitis SK14 | STACA0001_1080 | -89 | 5.5 | TTGTGAAAAAATGTACAA |
| Staphylococcus epidermidis ATCC 12228 | SE1975 | -86 | 5.5 | TTGTGAAAAAATGTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0654 | -91 | 5.3 | ATGTGAAAAATTGTACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0136 | -58 | 5.4 | TTGTGAAAAGTTTCATAA |
|
Position: -151
Score: 5 Sequence: ATGTTCAATTTTTCACAA
Locus tag: SLGD_00605
|
||||
| SLGD_00605 | -151 | 5 | ATGTTCAATTTTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narK | ||||
| Ortholog function: nitrate-nitrite antiporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2176 | -168 | 4.6 | ATGTTCACTTTTTCACAA |
| Staphylococcus capitis SK14 | STACA0001_1087 | -156 | 4.9 | ATGTTCATTTTTTCACAA |
| Staphylococcus epidermidis ATCC 12228 | SE1968 | -149 | 4.9 | ATGTTCATATTTTCACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0661 | -125 | 4.9 | ATGTTCATTTTTTCACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0144 | -73 | 5.1 | ATGTTAAACTTATCACAA |
|
Position: -82
Score: 5.9 Sequence: TTGTGAAAAACTTCACAA
Locus tag: SLGD_00672
|
||||
| SLGD_00672 | -82 | 5.9 | TTGTGAAAAACTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lctP | ||||
| Ortholog function: L-lactate permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2156 | -124 | 6 | TTGTGAAAAAAATCACAT |
| Staphylococcus capitis SK14 | STACA0001_1119 | -129 | 5.9 | TTGTGAAAAAGTTCACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0691 | -161 | 5.9 | TTGTGAAAAAGTTCACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0537 | -76 | 6.3 | TTGTGAAAAAATTCACAA |
|
Position: -100
Score: 4.9 Sequence: ATGCTAATTTTTTCACAA
Locus tag: SLGD_01420
|
||||
| SLGD_01420 | -100 | 4.9 | ATGCTAATTTTTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: srrA | ||||
| Ortholog function: Staphylococcal respiratory response protein SrrA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1323 | -103 | 5.6 | TTGAGAATTTTTTCACAA |
| Staphylococcus capitis SK14 | STACA0001_1733 | -106 | 5.2 | TTGAGATTTTTTTCACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1176 | -104 | 4.9 | TTGATATTTTTTTCACAA |
| Staphylococcus haemolyticus JCSC1435 | SH1424 | -101 | 4.8 | TTGCTATTTTTTTCACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1260 | -105 | 5.1 | ATGATAATTTTTTCACAA |