Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex regulog to Staphylococcus lugdunensis HKU09-01

Reference regulog properties
Source regulog: Rex - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus lugdunensis HKU09-01
Orthologous TF(s) SLGD_00976
Regulated genes 12
Built upon 74 sites [see more]
Predicted regulatory interactions in Staphylococcus lugdunensis HKU09-01
Locus tag Position Score Sequence
Position: -73
Score: 6
Sequence: ATGTGAAAAAAATCACAA
Locus tag: SLGD_00171
SLGD_00171 -73 6 ATGTGAAAAAAATCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Staphylococcus aureus subsp. aureus N315 SA0218 -96 6 ATGTGAAAAAAATCACAA
Staphylococcus epidermidis ATCC 12228 SE0214 -74 5.8 ATGTGAAATTAATCACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2017 -93 5.3 AAGTGATTTTTTTCACAA
Macrococcus caseolyticus JCSC5402 MCCL_0434 -74 4.7 TTGTGATACTTTTCACGT
Position: -38
Score: 5.4
Sequence: TTGTGAGAATTTTCACAT
Locus tag: SLGD_00455
SLGD_00455 -38 5.4 TTGTGAGAATTTTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhB
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent
Staphylococcus capitis SK14 STACA0001_0960 -36 6.2 TTGTGAAAATATTCACAA
Staphylococcus epidermidis ATCC 12228 SE2098 -37 5.4 TTGCGAAAAATTTCACAT
Staphylococcus haemolyticus JCSC1435 SH0522 -38 6.1 TTGTGAAAATATTCACAT
Position: -150
Score: 6.3
Sequence: TTGTGAAATAATTCACAA
Locus tag: SLGD_00476
SLGD_00476 -150 6.3 TTGTGAAATAATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ddh
Ortholog function: D-lactate dehydrogenase (EC 1.1.1.28)
Staphylococcus aureus subsp. aureus N315 SA2312 -39 5.9 TTGTGATATTTTTCACAA
Staphylococcus capitis SK14 STACA0001_0984 -119 5.8 TTGTGAAAACTTTCACAA
Staphylococcus epidermidis ATCC 12228 SE2074 -100 5.5 TAGTGAATTAAATCACAT
-56 4.9 TTGTGAATGTTTTTACTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2121 -81 6 TTGTGAATATATTCACAT
Staphylococcus haemolyticus JCSC1435 SH0545 -203 5.5 ATGTGAATTTTTTAACAA
-154 6.2 TTGTGAATAAATTCACAA
Position: -221
Score: 6.1
Sequence: TTGTGAATTATTTCACAA
Locus tag: SLGD_00477
SLGD_00477 -221 6.1 TTGTGAATTATTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frp
Ortholog function: NAD(P)H-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA2311 -185 6 TTGTGAAAAATATCACAA
Staphylococcus capitis SK14 STACA0001_0985 -197 5.8 TTGTGAAAGTTTTCACAA
Staphylococcus epidermidis ATCC 12228 SE2073 -208 4.9 TAGTAAAAACATTCACAA
-164 5.3 ATGTGATTTAATTCACTA
Staphylococcus haemolyticus JCSC1435 SH0546 -182 6.2 TTGTGAATTTATTCACAA
-133 5.6 TTGTTAAAAAATTCACAT
Position: -88
Score: 5.6
Sequence: TTGTGAAATACATCACAT
Locus tag: SLGD_00514
SLGD_00514 -88 5.6 TTGTGAAATACATCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2268
Ortholog function: conserved hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2268 -129 5.7 TTGTGAAATACATCACAA
Staphylococcus capitis SK14 STACA0001_1015 -94 5.7 TTGTGAAAAGTATCACAA
Staphylococcus epidermidis ATCC 12228 SE2038 -91 5.7 TTGTGAAATGTATCACAA
Staphylococcus haemolyticus JCSC1435 SH0583 -87 5.7 TTGTGAAAAGTATCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0417 -107 6.1 TTGTGAAATTAATCACAA
Position: -144
Score: 5.9
Sequence: TTGTGATTTTATTCACAA
Locus tag: SLGD_00594
SLGD_00594 -144 5.9 TTGTGATTTTATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasD
Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Staphylococcus aureus subsp. aureus N315 SA2188 -64 5.3 ATGTGATTCTTTTCACAA
Staphylococcus capitis SK14 STACA0001_1077 -64 6 ATGTGAATAAAATCACAA
Staphylococcus epidermidis ATCC 12228 SE1978 -145 5.6 ATGTGAATTACATCACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1897 -64 5.7 TTGTGAATACATTCACAT
Staphylococcus haemolyticus JCSC1435 SH0651 -141 5.6 TTGTGAAAATCATCACAT
Macrococcus caseolyticus JCSC5402 MCCL_1340 -91 5.8 ATGTGAACATATTCACAA
Position: -88
Score: 5.4
Sequence: TTGTGAAAAAATATACAA
Locus tag: SLGD_00597
SLGD_00597 -88 5.4 TTGTGAAAAAATATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Staphylococcus aureus subsp. aureus N315 SA2185 -107 5.5 TTGTGAAAAAATGTACAA
Staphylococcus capitis SK14 STACA0001_1080 -89 5.5 TTGTGAAAAAATGTACAA
Staphylococcus epidermidis ATCC 12228 SE1975 -86 5.5 TTGTGAAAAAATGTACAA
Staphylococcus haemolyticus JCSC1435 SH0654 -91 5.3 ATGTGAAAAATTGTACAA
Macrococcus caseolyticus JCSC5402 MCCL_0136 -58 5.4 TTGTGAAAAGTTTCATAA
Position: -151
Score: 5
Sequence: ATGTTCAATTTTTCACAA
Locus tag: SLGD_00605
SLGD_00605 -151 5 ATGTTCAATTTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: nitrate-nitrite antiporter
Staphylococcus aureus subsp. aureus N315 SA2176 -168 4.6 ATGTTCACTTTTTCACAA
Staphylococcus capitis SK14 STACA0001_1087 -156 4.9 ATGTTCATTTTTTCACAA
Staphylococcus epidermidis ATCC 12228 SE1968 -149 4.9 ATGTTCATATTTTCACAA
Staphylococcus haemolyticus JCSC1435 SH0661 -125 4.9 ATGTTCATTTTTTCACAA
Macrococcus caseolyticus JCSC5402 MCCL_0144 -73 5.1 ATGTTAAACTTATCACAA
Position: -82
Score: 5.9
Sequence: TTGTGAAAAACTTCACAA
Locus tag: SLGD_00672
SLGD_00672 -82 5.9 TTGTGAAAAACTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lctP
Ortholog function: L-lactate permease
Staphylococcus aureus subsp. aureus N315 SA2156 -124 6 TTGTGAAAAAAATCACAT
Staphylococcus capitis SK14 STACA0001_1119 -129 5.9 TTGTGAAAAAGTTCACAA
Staphylococcus haemolyticus JCSC1435 SH0691 -161 5.9 TTGTGAAAAAGTTCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0537 -76 6.3 TTGTGAAAAAATTCACAA
Position: -100
Score: 4.9
Sequence: ATGCTAATTTTTTCACAA
Locus tag: SLGD_01420
SLGD_01420 -100 4.9 ATGCTAATTTTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: srrA
Ortholog function: Staphylococcal respiratory response protein SrrA
Staphylococcus aureus subsp. aureus N315 SA1323 -103 5.6 TTGAGAATTTTTTCACAA
Staphylococcus capitis SK14 STACA0001_1733 -106 5.2 TTGAGATTTTTTTCACAT
Staphylococcus epidermidis ATCC 12228 SE1176 -104 4.9 TTGATATTTTTTTCACAA
Staphylococcus haemolyticus JCSC1435 SH1424 -101 4.8 TTGCTATTTTTTTCACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1260 -105 5.1 ATGATAATTTTTTCACAA
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