Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlnR regulog to Staphylococcus lugdunensis HKU09-01

Reference regulog properties
Source regulog: GlnR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus lugdunensis HKU09-01
Orthologous TF(s) SLGD_01583
Regulated genes 2
Built upon 14 sites [see more]
Predicted regulatory interactions in Staphylococcus lugdunensis HKU09-01
Locus tag Position Score Sequence
Position: -96
Score: 4.9
Sequence: TTGTTATATTATGTTACAT
Position: -74
Score: 4.9
Sequence: GTGTTAATTTATCTTACGT
Locus tag: SLGD_00979
SLGD_00979 -96 4.9 TTGTTATATTATGTTACAT
-74 4.9 GTGTTAATTTATCTTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: ammonium transporter
Staphylococcus aureus subsp. aureus N315 SA1848 -73 4.6 ATGTAATAAAACTTAACGC
Staphylococcus capitis SK14 STACA0001_2123 -96 5.3 ATGTCACTTAATCTTACAC
Staphylococcus epidermidis ATCC 12228 SE1644 -96 5.3 ATGTAACTTAAAGTGACAT
-74 4.5 GTGTAACATGACCTTACCT
Staphylococcus haemolyticus JCSC1435 SH0989 -96 4.8 TTGTTATATTATGTAACAT
-74 4.7 GTGTCATTTTATCTTACAC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2288 -96 4.8 GCGTTAGAAAAGGTAACAT
Position: -113
Score: 5.9
Sequence: ATGTTAGAAAACCTGACAT
Locus tag: SLGD_01583
SLGD_01583 -113 5.9 ATGTTAGAAAACCTGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: HTH-type transcriptional regulator GlnR
Staphylococcus aureus subsp. aureus N315 SA1149 -84 5.9 ATGTTAGAAAACCTGACAT
Staphylococcus capitis SK14 STACA0001_1553 -85 6 ATGTTAGAAAACCTTACAT
Staphylococcus epidermidis ATCC 12228 SE0986 -88 5.9 ATGTCAGAAAACCTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0958 -85 5.9 ATGTCAGAAAACCTTACAT
Staphylococcus haemolyticus JCSC1435 SH1601 -86 6 ATGTAAGAAAACCTAACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1452 -83 6 ATGTTAGAAAACCTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_0899 -103 6 ATGTAAGGTTTCCTTACAT