Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FapR regulog to Staphylococcus lugdunensis HKU09-01

Reference regulog properties
Source regulog: FapR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: FapR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Malonyl-CoA; Malonyl-ACP
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus lugdunensis HKU09-01
Orthologous TF(s) SLGD_01678
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Staphylococcus lugdunensis HKU09-01
Locus tag Position Score Sequence
Position: -47
Score: 5.4
Sequence: ATTAATATTAAGTAATAAT
Locus tag: SLGD_01068
SLGD_01068 -47 5.4 ATTAATATTAAGTAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: peroxide-responsive repressor PerR
Staphylococcus aureus subsp. aureus N315 SA1678 -49 4.8 ATTTATAGTAAGTAATAAT
Staphylococcus capitis SK14 STACA0001_1914 -48 5.4 ATTAATATTAAGTAATAAT
Staphylococcus epidermidis ATCC 12228 SE1545 -48 5.4 ATTAATATTAAGTAATAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1434 -48 4.8 ATTTATAGTAAGTAATAAT
Staphylococcus haemolyticus JCSC1435 SH1102 -47 5.5 ATTAATATCAAGTAATAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0932 -48 5.4 ATTAATATTAAGTAATAAT
Position: -35
Score: 6
Sequence: TTTAAGACTTGGTACTAAA
Locus tag: SLGD_01678
SLGD_01678 -35 6 TTTAAGACTTGGTACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fapR
Ortholog function: transcriptional regulator of fatty acid biosynthesis
Staphylococcus aureus subsp. aureus N315 SA1071 -36 6 TTTAAGACTAGGTACTAAA
Staphylococcus capitis SK14 STACA0001_2225 -34 6 TTTAAGACTTGGTACTAAA
Staphylococcus epidermidis ATCC 12228 SE0903 17 6 TTTAAGACTTGGTACTAAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0851 -36 5.6 CTTAAGACTTGGTACTAAA
Staphylococcus haemolyticus JCSC1435 SH1686 -42 5.9 TTTAAGACTTGGTACTAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1541 -39 6 TTTAAGACTTGGTACTAAA
Position: -43
Score: 6.3
Sequence: ATTAATACCTGGTATTAAA
Locus tag: SLGD_01882
SLGD_01882 -43 6.3 ATTAATACCTGGTATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabH
Ortholog function: 3-oxoacyl-[acyl-carrier-protein] synthase III
Staphylococcus aureus subsp. aureus N315 SA0842 -44 6.3 ATTAATACCTGGTATTAAA
Staphylococcus capitis SK14 STACA0001_0149 -44 6.3 ATTAATACCTGGTATTAAA
Staphylococcus epidermidis ATCC 12228 SE0677 -43 6.3 ATTAATACCTGGTATTAAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0584 -44 6.3 ATTAATACCTGGTATTAAA
Staphylococcus haemolyticus JCSC1435 SH1973 -44 6.3 ATTAATACCTGGTATTAAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1798 -44 6.3 ATTAATACCTGGTATTAAA
Macrococcus caseolyticus JCSC5402 MCCL_0603 -42 5.8 ATTAGTACCAGATACTAAA
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