Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Staphylococcus epidermidis ATCC 12228

Reference regulog properties
Source regulog: Zur - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus epidermidis ATCC 12228
Orthologous TF(s) SE1241
Regulated genes 7
Built upon 56 sites [see more]
Predicted regulatory interactions in Staphylococcus epidermidis ATCC 12228
Locus tag Position Score Sequence
Position: -53
Score: 6.8
Sequence: TAAATCGTAATAATTACGTTTTT
Locus tag: SE0191
SE0191 -53 6.8 TAAATCGTAATAATTACGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2370
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2370 -69 7.4 TAAATCGTAATTATTACGATTTA
Staphylococcus epidermidis ATCC 12228 SE0191 -244 6.1 TAAATCGAAATTGTTACGCTTTA
-53 6.8 TAAATCGTAATAATTACGTTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1906 -83 6.4 TAAAACATAACGATTACGATTTA
Position: -226
Score: 6.8
Sequence: AAAAACGTAATTATTACGATTTA
Locus tag: SE0193
SE0193 -226 6.8 AAAAACGTAATTATTACGATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA2
Ortholog function: Zinc ABC transporter, periplasmic-binding protein ZnuA
Staphylococcus epidermidis ATCC 12228 SE0193 -226 6.8 AAAAACGTAATTATTACGATTTA
-35 6.1 TAAAGCGTAACAATTTCGATTTA
Staphylococcus haemolyticus JCSC1435 SH0125 -188 7 CAAATCGTAATTATTACTATTTA
-35 6.4 TAAAACGTAATGATTTTGATTTA
Position: -42
Score: 7.2
Sequence: TAAATCGTAATAATTACGTTTTA
Locus tag: SE0639
SE0639 -42 7.2 TAAATCGTAATAATTACGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0806
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0806 -42 6.4 TAAATCGTAACGATTACGCTTTA
Staphylococcus capitis SK14 STACA0001_0181 -52 6.8 TAAATAGTAATTATTTCGATTTA
Staphylococcus epidermidis ATCC 12228 SE0639 -42 7.2 TAAATCGTAATAATTACGTTTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0550 -36 7 TAAATCGAAATTATTACGATTTA
Staphylococcus haemolyticus JCSC1435 SH2006 -42 7.2 TAAATCGTAATTATTACGTTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1830 -40 7.4 TAAATCGTAATTATTACGATTTA
Position: -43
Score: 5.3
Sequence: TAAATCGTAAGAATTCCTAACAA
Locus tag: SE1017
SE1017 -43 5.3 TAAATCGTAAGAATTCCTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmG2
Ortholog function: 50S ribosomal protein L33
Staphylococcus aureus subsp. aureus N315 SAS042 -38 5.4 TAAATCGTAAAGATTCCTAACAA
Staphylococcus capitis SK14 STACA0001_1578 -43 5.3 TAAATCGTAAGAATTCCTAACAA
Staphylococcus epidermidis ATCC 12228 SE1017 -43 5.3 TAAATCGTAAGAATTCCTAACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0976 -227 6.7 ATAATCGTAATTATTACGATTTA
Staphylococcus haemolyticus JCSC1435 SH1572 -43 6.5 TAAATCGTAAGTATTCCTATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1422 -39 7.1 TAAAACGTAATAATTACTATTTA
Position: -42
Score: 6.9
Sequence: TAAAACGTAATTATTACGATTTG
Locus tag: SE1018
SE1018 -42 6.9 TAAAACGTAATTATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: 30S ribosomal protein S14
Staphylococcus aureus subsp. aureus N315 SA1171 -45 7.1 TAAATCGTAATAATTACGATTTG
Staphylococcus capitis SK14 STACA0001_1579 -42 7.2 TAAAACGTAATAATTACGATTTA
Staphylococcus epidermidis ATCC 12228 SE1018 -42 6.9 TAAAACGTAATTATTACGATTTG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0977 -54 6.7 TAAATCGTAATAATTACGATTAT
Staphylococcus haemolyticus JCSC1435 SH1571 -43 7.2 TAAAACGTAATAATTACGATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1421 -43 6.9 TAAAACGTAATAATTACGATTTG
Position: -58
Score: 5.8
Sequence: ATAGTCGTAAACATTACTATTTA
Locus tag: SE1243
SE1243 -58 5.8 ATAGTCGTAAACATTACTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC
Ortholog function: Zinc ABC transporter, ATP-binding protein ZnuC
Staphylococcus aureus subsp. aureus N315 SA1385 -69 5.5 TGAGTCGTAAACATTACTGTTTA
Staphylococcus capitis SK14 STACA0001_1794 -66 6.1 TTAGTCGTAAACATTACTATTTA
Staphylococcus epidermidis ATCC 12228 SE1243 -58 5.8 ATAGTCGTAAACATTACTATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1177 -65 6.2 TTAATCGTAAGCATTACAATTTA
Staphylococcus haemolyticus JCSC1435 SH1360 -66 6.2 CAAGTCGTAAACATTACTATTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1200 -66 6.1 TAATTCGGAAACATTACTATTTA
Position: -43
Score: 7.1
Sequence: TAAAACGTAATAATTACTATTTA
Locus tag: SE2335
SE2335 -43 7.1 TAAAACGTAATAATTACTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Staphylococcus aureus subsp. aureus N315 SA0410 -50 6.4 TAAAACGGAATTATTCCTATTTA
Staphylococcus capitis SK14 STACA0001_1465 -43 7.1 TAAAACGTAATAATTACTATTTA
Staphylococcus epidermidis ATCC 12228 SE2335 -43 7.1 TAAAACGTAATAATTACTATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1955 -58 7.1 TAAATCGTAATTATTACGATTAA
Staphylococcus haemolyticus JCSC1435 SH0144 -44 7.2 TAAAACGTAATTATTACGATTTA
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