Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SaeR regulog to Staphylococcus epidermidis ATCC 12228

Reference regulog properties
Source regulog: SaeR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Virulence
Effector: SaeS, sensor histidine kinase
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus epidermidis ATCC 12228
Orthologous TF(s) SE0479
Regulated genes 3
Built upon 45 sites [see more]
Predicted regulatory interactions in Staphylococcus epidermidis ATCC 12228
Locus tag Position Score Sequence
Position: -99
Score: 6.1
Sequence: GTTAATAAATAGTTAA
Locus tag: SE0163
SE0163 -99 6.1 GTTAATAAATAGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0213
Ortholog function: putative membrane protein
Staphylococcus aureus subsp. aureus N315 SA0213 -100 5.8 ATTAATAAATAGTTAA
Staphylococcus capitis SK14 STACA0001_0021 -99 5.8 ATTAATAAATAGTTAA
Staphylococcus epidermidis ATCC 12228 SE0163 -99 6.1 GTTAATAAATAGTTAA
Position: -79
Score: 5.9
Sequence: GTTAAGAAATAGTTAA
Locus tag: SE0481
SE0481 -79 5.9 GTTAAGAAATAGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: saeP
Ortholog function: hypothetical protein SaeP
Staphylococcus aureus subsp. aureus N315 SA0663 -99 5 GTTAAGCGATATTTAA
-78 5.9 GTTAAGAATTAGTTAA
Staphylococcus capitis SK14 STACA0001_0321 -100 5 TTTAATTCTTTTTTAA
-79 5.9 GTTAATAAAAAGTTAA
Staphylococcus epidermidis ATCC 12228 SE0481 -100 5 TTTAATTCTTTTTTAA
-79 5.9 GTTAAGAAATAGTTAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0350 -88 5.8 ATTAATAAATAGTTAA
Position: -65
Score: 5.3
Sequence: ATTAATAATTTTTTAA
Locus tag: SE2396
SE2396 -65 5.3 ATTAATAATTTTTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE2396
Ortholog function: major facilitator family transporter
Staphylococcus capitis SK14 STACA0001_1401 -87 5.4 GTTAATAAAATTTTAA
-65 5 GTTAATTGTTACTTAA
Staphylococcus epidermidis ATCC 12228 SE2396 -288 5.1 TTTAATAATAAATTAA
-65 5.3 ATTAATAATTTTTTAA