Regulog SaeR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | OmpR |
| Regulation mode: | activator |
| Biological process: | Virulence |
| Effector: | SaeS, sensor histidine kinase |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - OmpR
- By effector - SaeS, sensor histidine kinase
- By pathway - Virulence
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 32 | 22 |
| Staphylococcus capitis SK14 | 6 | 3 |
| Staphylococcus epidermidis ATCC 12228 | 6 | 3 |
| Staphylococcus carnosus subsp. carnosus TM300 | 7 | 2 |
| Staphylococcus haemolyticus JCSC1435 | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | ||
| Macrococcus caseolyticus JCSC5402 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| tst |
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Staphylococcus aureus subsp. aureus N315 Site: position = -110 score = 5.19121 sequence = ATTAATATATATTTAA Gene: SA1819: toxic shock syndrome toxin-1 |
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toxic shock syndrome toxin-1 |
| CRON 2. | ||||||||
| splA |
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Staphylococcus aureus subsp. aureus N315 Site: position = -121 score = 5.58116 sequence = TTTAATAAAATGTTAA Site: position = -99 score = 5.63725 sequence = GTTAATTAATATTTAA Gene: SA1631: serine protease SplA |
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serine protease SplA |
| CRON 3. | ||||||||
| set15 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -123 score = 5.31469 sequence = ATTAATTTTTAGTTAA Gene: SA0393: superantigen-like protein |
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superantigen-like protein |
| SA0394 |
Gene: SA0394: hypothetical protein |
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hypothetical protein |
| CRON 4. | ||||||||
| set13 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -175 score = 5.24488 sequence = ATTAAAAATCAGTTAA Gene: SA0389: superantigen-like protein |
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superantigen-like protein |
| CRON 5. | ||||||||
| set11 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -145 score = 5.16731 sequence = GTTCAAAAATAGTTAA Site: position = -134 score = 4.88005 sequence = GTTAAAAAGAGGTTAA Gene: SA0387: superantigen-like protein |
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superantigen-like protein |
| CRON 6. | ||||||||
| SE2396 |
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Staphylococcus capitis SK14 Site: position = -65 score = 4.95339 sequence = GTTAATTGTTACTTAA Site: position = -87 score = 5.3838 sequence = GTTAATAAAATTTTAA Gene: STACA0001_1401: major facilitator family transporter |
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Staphylococcus epidermidis ATCC 12228 Site: position = -288 score = 5.13475 sequence = TTTAATAATAAATTAA Site: position = -65 score = 5.26697 sequence = ATTAATAATTTTTTAA Gene: SE2396: transporter |
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major facilitator family transporter |
| CRON 7. | ||||||||
| Sca_1510 |
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Staphylococcus carnosus subsp. carnosus TM300 Site: position = -50 score = 4.94834 sequence = ATTAATATTCTGTTAA Gene: Sca_1510: hypothetical protein |
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hypothetical protein |
| sbi |
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Staphylococcus aureus subsp. aureus N315 Site: position = -92 score = 6.05334 sequence = GTTAATAATTAGTTAA Gene: SA2206: IgG-binding protein SBI |
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Gene: Sca_1511: IgG-binding protein SBI |
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IgG-binding protein SBI |
| CRON 8. | ||||||||
| sak |
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Staphylococcus aureus subsp. aureus N315 Site: position = -175 score = 5.45869 sequence = GTTAAATATTTGTTAA Site: position = -164 score = 5.3996 sequence = GTTAATTATTTTTTAA Gene: SA1758: staphylokinase |
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staphylokinase |
| CRON 9. | ||||||||
| saeP |
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Staphylococcus aureus subsp. aureus N315 Site: position = -99 score = 5.02694 sequence = GTTAAGCGATATTTAA Site: position = -78 score = 5.86932 sequence = GTTAAGAATTAGTTAA Gene: SA0663: hypothetical protein SaeP |
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Staphylococcus capitis SK14 Site: position = -79 score = 5.89123 sequence = GTTAATAAAAAGTTAA Site: position = -100 score = 4.99187 sequence = TTTAATTCTTTTTTAA Gene: STACA0001_0321: hypothetical protein SaeP |
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Staphylococcus epidermidis ATCC 12228 Site: position = -79 score = 5.89123 sequence = GTTAAGAAATAGTTAA Site: position = -100 score = 4.99187 sequence = TTTAATTCTTTTTTAA Gene: SE0481: hypothetical protein SaeP |
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Staphylococcus carnosus subsp. carnosus TM300 Site: position = -88 score = 5.79631 sequence = ATTAATAAATAGTTAA Gene: Sca_0350: hypothetical protein SaeP |
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hypothetical protein SaeP |
| saeQ |
Gene: SA0662: hypothetical protein SaeQ |
Gene: STACA0001_0322: hypothetical protein SaeQ |
Gene: SE0480: hypothetical protein SaeQ |
Gene: Sca_0351: hypothetical protein SaeQ |
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hypothetical protein SaeQ |
| saeR |
Gene: SA0661: response regulator SaeR |
Gene: STACA0001_0323: response regulator SaeR |
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2
Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_0352a: response regulator SaeR Gene: Sca_0352: response regulator SaeR |
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response regulator SaeR |
| saeS |
Gene: SA0660: histidine protein kinase SaeS |
Gene: STACA0001_0324: histidine protein kinase SaeS |
Gene: SE0478: histidine protein kinase SaeS |
Gene: Sca_0353: histidine protein kinase SaeS |
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histidine protein kinase SaeS |
| saeR |
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Gene: SE0479: response regulator SaeR |
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response regulator SaeR |
| CRON 10. | ||||||||
| SA1818 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -98 score = 4.7376 sequence = TTTATGTATTTGTTAA Site: position = -87 score = 5.76165 sequence = GTTAATAATTATTTAA Gene: SA1818: lipoprotein involved in pathogenicity |
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lipoprotein involved in pathogenicity |
| CRON 11. | ||||||||
| SA1754 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -77 score = 5.24012 sequence = GTTAATGAATAATTAA Gene: SA1754: hypothetical protein |
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hypothetical protein |
| CRON 12. | ||||||||
| SA1633 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -86 score = 4.97027 sequence = TTTGATATTTAGTTAA Site: position = -97 score = 4.57908 sequence = GTTAATACATTTTTGA Site: position = -108 score = 5.76185 sequence = GTTAATAGATAGTTAA Gene: SA1633: beta-lactamase |
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beta-lactamase |
| CRON 13. | ||||||||
| SA1000 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -99 score = 5.2661 sequence = ATTAATGTTTAGTTAA Site: position = -88 score = 6.07525 sequence = GTTAATAAATAGTTAA Gene: SA1000: similar to fibrinogen binding protein |
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similar to fibrinogen binding protein |
| CRON 14. | ||||||||
| SA0357 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -95 score = 5.42376 sequence = GTTAATCAAGAGTTAA Gene: SA0357: hypothetical protein similar to exotoxin 2 |
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hypothetical protein similar to exotoxin 2 |
| CRON 15. | ||||||||
| SA0213 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -100 score = 5.79631 sequence = ATTAATAAATAGTTAA Gene: SA0213: putative membrane protein |
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Staphylococcus capitis SK14 Site: position = -99 score = 5.79631 sequence = ATTAATAAATAGTTAA Gene: STACA0001_0021: putative membrane protein |
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Staphylococcus epidermidis ATCC 12228 Site: position = -99 score = 6.07525 sequence = GTTAATAAATAGTTAA Gene: SE0163: putative membrane protein |
Gene: Sca_0082: putative membrane protein |
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putative membrane protein |
| CRON 16. | ||||||||
| map |
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Staphylococcus aureus subsp. aureus N315 Site: position = -88 score = 5.16408 sequence = ATTAATATTCAGTTAA Gene: SA1751: MHC class II analog protein |
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MHC class II analog protein |
| map |
Gene: SA1750: MHC class II analog protein |
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MHC class II analog protein |
| CRON 17. | ||||||||
| lukS |
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Staphylococcus aureus subsp. aureus N315 Site: position = -99 score = 5.98092 sequence = TTTAATAAATAGTTAA Gene: SA1813: leukocidin lukS |
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leukocidin lukS |
| lukF |
Gene: SA1812: leukocidin lukF |
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leukocidin lukF |
| CRON 18. | ||||||||
| lukE |
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Staphylococcus aureus subsp. aureus N315 Site: position = -86 score = 5.48911 sequence = TTTAATGAACAGTTAA Site: position = -335 score = 5.75643 sequence = GTTAATAATCAGTTAA Gene: SA1638: leukotoxin LukE |
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leukotoxin LukE |
| lukD |
Gene: SA1637: leukotoxin, LukD |
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leukotoxin, LukD |
| CRON 19. | ||||||||
| lpl2 |
*2
Staphylococcus aureus subsp. aureus N315 Gene: SA0397: lipoprotein involved in pathogenicity Site: position = -253 score = 5.98092 sequence = TTTAATAAATAGTTAA Gene: SA0396: lipoprotein involved in pathogenicity |
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lipoprotein involved in pathogenicity |
| lpl3 |
Gene: SA0398: lipoprotein involved in pathogenicity |
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lipoprotein involved in pathogenicity |
| CRON 20. | ||||||||
| hlgC |
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Staphylococcus aureus subsp. aureus N315 Site: position = -86 score = 5.58345 sequence = GTTAATGAACAGTTAA Gene: SA2208: gamma-hemolysin component C |
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gamma-hemolysin component C |
| hlgB |
Gene: SA2209: gamma-hemolysin component B |
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gamma-hemolysin component B |
| CRON 21. | ||||||||
| hla |
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Staphylococcus aureus subsp. aureus N315 Site: position = -190 score = 5.41799 sequence = TTTAAATAAAAGTTAA Gene: SA1007: alpha-hemolysin |
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alpha-hemolysin |
| CRON 22. | ||||||||
| SA1003 |
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Staphylococcus aureus subsp. aureus N315 Site: position = -81 score = 5.7744 sequence = ATTAATAATTAGTTAA Site: position = -85 score = 4.61336 sequence = GTTAATTAATAATTAG Gene: efb: similar to fibrinogen binding protein |
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similar to fibrinogen binding protein |
| CRON 23. | ||||||||
| coa |
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Staphylococcus aureus subsp. aureus N315 Site: position = -82 score = 5.76185 sequence = GTTAATATATAGTTAA Site: position = -103 score = 4.65397 sequence = GTTAATGCTTTGTTTA Gene: SA0222: staphylocoagulase precursor |
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staphylocoagulase precursor |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |