Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NreC regulog to Staphylococcus epidermidis ATCC 12228

Reference regulog properties
Source regulog: NreC - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Nitrate and nitrite respiration
Effector: NreB, sensor histidine kinase (Nitrate, Nitrite)
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus epidermidis ATCC 12228
Orthologous TF(s) SE1969
Regulated genes 3
Built upon 17 sites [see more]
Predicted regulatory interactions in Staphylococcus epidermidis ATCC 12228
Locus tag Position Score Sequence
Position: -165
Score: 5
Sequence: ATCAGGGTATGTCCTTAT
Locus tag: SE1968
SE1968 -165 5 ATCAGGGTATGTCCTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: nitrate-nitrite antiporter
Staphylococcus aureus subsp. aureus N315 SA2176 -184 5.6 ATAAGGGAAAATCCTTAT
Staphylococcus capitis SK14 STACA0001_1087 -172 5.2 TTAAGGGTAAATCCTTAT
Staphylococcus epidermidis ATCC 12228 SE1968 -165 5 ATCAGGGTATGTCCTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1887 -157 5.5 TTAAGGGAAAGCCCTTAT
Staphylococcus haemolyticus JCSC1435 SH0661 -141 5.7 ATAAGGGAATATCCTTAT
Position: -113
Score: 5.9
Sequence: ATTAGGACATTCCCTAAT
Locus tag: SE1975
SE1975 -113 5.9 ATTAGGACATTCCCTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: respiratory nitrate reductase alpha chain
Staphylococcus aureus subsp. aureus N315 SA2185 -134 5.9 ATTAGGTGATTCCCTAAT
Staphylococcus capitis SK14 STACA0001_1080 -116 5.6 ATTAGGTATTTCCCTAAT
Staphylococcus epidermidis ATCC 12228 SE1975 -113 5.9 ATTAGGACATTCCCTAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1894 -123 5.4 TATAGGAGAATCCCTAAT
Staphylococcus haemolyticus JCSC1435 SH0654 -118 5.9 ATTAGGACATTCCCTAAT
Macrococcus caseolyticus JCSC5402 MCCL_0136 -85 5.4 TTTAGGACATTCCCCAAT
Position: -174
Score: 5.8
Sequence: ATTAGGGAAATCCCCGAT
Locus tag: SE1978
SE1978 -174 5.8 ATTAGGGAAATCCCCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasD
Ortholog function: assimilatory nitrite reductase, large subunit
Staphylococcus aureus subsp. aureus N315 SA2188 -93 5.8 ATCAGGGAATTCCCTGAT
Staphylococcus capitis SK14 STACA0001_1077 -93 5.6 ATAAGGGTATTCCCTACT
Staphylococcus epidermidis ATCC 12228 SE1978 -174 5.8 ATTAGGGAAATCCCCGAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1897 -93 5.8 ATAAGGGGATTCCCTATT
Staphylococcus haemolyticus JCSC1435 SH0651 -170 5.8 ATTAGGGAATTCCCCGAT
Macrococcus caseolyticus JCSC5402 MCCL_1340 -118 5.5 TATAGGGAAATCCCTATT
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