Propagation of LexA regulog to Staphylococcus epidermidis ATCC 12228

Reference regulog properties
Source regulog:	LexA - Staphylococcaceae
Regulator type:	Transcription factor
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Phylum:	Firmicutes
Propagated regulon:
Target genome	Staphylococcus epidermidis ATCC 12228
Orthologous TF(s)	SE1022
Regulated genes	9

Built upon 85 sites [see more]

Predicted regulatory interactions in *Staphylococcus epidermidis ATCC 12228*
	Locus tag	Position	Score	Sequence
Position: -116 Score: 5.9 Sequence: AAGCGAACATTTGTTCGTTT Locus tag: SE0511
	SE0511	-116	5.9	AAGCGAACATTTGTTCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0684
Ortholog function: putative permease
Staphylococcus capitis SK14	STACA0001_0299	-123	4.8	AACAGAACATGTGTTCGTGA
Staphylococcus epidermidis ATCC 12228	SE0511	-116	5.9	AAGCGAACATTTGTTCGTTT
Staphylococcus haemolyticus JCSC1435	SH2164	-124	5.6	AACAGAACATTTGTTCGTAT

Position: -130 Score: 5.7 Sequence: AAGCGAACAAATGTTTGTAT Locus tag: SE0541
	SE0541	-130	5.7	AAGCGAACAAATGTTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: excinuclease ABC subunit B
Staphylococcus aureus subsp. aureus N315	SA0713	-107	5.4	TTACGAACAAACGTTTGCTT
Staphylococcus capitis SK14	STACA0001_0273	-126	5.4	AAGCGAACAAACGTTTGCTT
Staphylococcus epidermidis ATCC 12228	SE0541	-130	5.7	AAGCGAACAAATGTTTGTAT
Staphylococcus carnosus subsp. carnosus TM300	Sca_0407	-267	4.8	CTGCGAACAGATGTTTGTAC
Staphylococcus haemolyticus JCSC1435	SH2131	-266	5.5	AAGCGAACAAACGTTTGTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP1959	-176	5.6	CTACGAACAAATGTTTGTTT
Macrococcus caseolyticus JCSC5402	MCCL_0509	-67	5.3	TTACGAACAAATGTTTGTAC

Position: -145 Score: 5.1 Sequence: ATAAGTACGTTTGTTCGTTT Position: -102 Score: 5.4 Sequence: ATACGAACAAATATTCGCAA Locus tag: SE0963
	SE0963	-145	5.1	ATAAGTACGTTTGTTCGTTT
		-102	5.4	ATACGAACAAATATTCGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: recombinase A
Staphylococcus aureus subsp. aureus N315	SA1128	-145	5.1	ATAAGCACGTTTGTTCGTTT
		-102	5.4	ATACGAACAAATATTCGCAA
Staphylococcus capitis SK14	STACA0001_2334	-146	4.9	ATAAGTACGTTTGTTCGATT
		-103	5.1	ACACGAACAAATATTCGCAA
Staphylococcus epidermidis ATCC 12228	SE0963	-145	5.1	ATAAGTACGTTTGTTCGTTT
		-102	5.4	ATACGAACAAATATTCGCAA
Staphylococcus carnosus subsp. carnosus TM300	Sca_0926	-102	5	AATCGAACAAACATTCGCAA
Staphylococcus haemolyticus JCSC1435	SH1628	-105	5.2	AAGCGAACAAATATTCGCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP1480	-104	5.1	TAGCGAACAAATATTCGCAA
Macrococcus caseolyticus JCSC5402	MCCL_0875	-132	5.2	ATACAAACAGACGTTCGCAT

Position: -33 Score: 5.7 Sequence: AAACGAACAAACGTTCTTAT Locus tag: SE1028
	SE1028	-33	5.7	AAACGAACAAACGTTCTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbcD
Ortholog function: exonuclease SbcD
Staphylococcus aureus subsp. aureus N315	SA1180	-31	5.3	AAGCGAACAAATGTTCTATA
Staphylococcus capitis SK14	STACA0001_1593	-33	5.9	ATACGAACAAATGTTCTTAT
Staphylococcus epidermidis ATCC 12228	SE1028	-33	5.7	AAACGAACAAACGTTCTTAT
Staphylococcus haemolyticus JCSC1435	SH1562	-31	5.2	ACACGAACAAATGTTCTAAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP1412	-33	5.2	ATACGAACAAACGTTCTAAG

Position: -33 Score: 5.2 Sequence: TAACGAACGTACGTTTGTAG Locus tag: SE1036
	SE1036	-33	5.2	TAACGAACGTACGTTTGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: parE
Ortholog function: DNA topoisomerase IV subunit B
Staphylococcus aureus subsp. aureus N315	SA1188	-32	5.3	AAACGAACGTACGTTTGCAG
Staphylococcus capitis SK14	STACA0001_1601	-33	5.4	AAACGAACGTACGTTTGTAG
Staphylococcus epidermidis ATCC 12228	SE1036	-33	5.2	TAACGAACGTACGTTTGTAG
Staphylococcus carnosus subsp. carnosus TM300	Sca_0995	-35	5.4	TAACGAACGTATGTTTGTAG
Staphylococcus haemolyticus JCSC1435	SH1554	-32	5.4	AAACGAACGTACGTTTGTAG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP1404	-33	5.4	AAACGAACGTACGTTTGTAG
Macrococcus caseolyticus JCSC5402	MCCL_1011	-31	5.2	TTTCGAACGTATGTTTGTAG

Position: -77 Score: 5.7 Sequence: ATAAGAACAAATGTTCTTAT Locus tag: SE1046
	SE1046	-77	5.7	ATAAGAACAAATGTTCTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrX
Ortholog function: Putative UV-damage repair protein
Staphylococcus aureus subsp. aureus N315	SA1196	-79	5	AACAGAACATTTGTTCTAAA
		-51	4.8	AATAGAACACGTGTTCGTAT
Staphylococcus capitis SK14	STACA0001_1610	-78	5	AATAGAACATTCGTTCTTGT
		-49	4.9	ATAAGAACACGTGTTCTTAT
Staphylococcus epidermidis ATCC 12228	SE1046	-77	5.7	ATAAGAACAAATGTTCTTAT
		-48	4.7	AATAGAACACGTGTTCTTAT
Staphylococcus carnosus subsp. carnosus TM300	Sca_1008	-82	5.2	AACAGAACATTTGTTCTTTA
		-53	5.7	ATAAGAACAAATGTTCGCAT
Staphylococcus carnosus subsp. carnosus TM300	Sca_1009	-82	5.2	AACAGAACATTTGTTCTTTA
		-53	5.7	ATAAGAACAAATGTTCGCAT
Staphylococcus haemolyticus JCSC1435	SH1545	-81	4.9	TAAAGAACATTAGTTCTTAT
		-52	5.8	AAAAGAACAAATGTTCGTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP1388	-80	5.1	ATTGGAACATTTGTTCTTAT
		-51	5.6	AATAGAACATTTGTTCGTAT
Macrococcus caseolyticus JCSC5402	MCCL_1033	-38	5.4	ATAAGAACATACGTTCTATT
		-10	4.9	AATAGAACGTATGTTCTGGT

Position: -52 Score: 5.6 Sequence: AACAGAACAAATGTTCGTAT Locus tag: SE1605
	SE1605	-52	5.6	AACAGAACAAATGTTCGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1738
Ortholog function: SPBc2 prophage-derived uncharacterized protein
Staphylococcus aureus subsp. aureus N315	SA1738	-51	5.3	AACAGAACACATGTTCGTAT
Staphylococcus capitis SK14	STACA0001_1975	-52	5.6	AATAGAACAAATGTTCGTAT
Staphylococcus epidermidis ATCC 12228	SE1605	-52	5.6	AACAGAACAAATGTTCGTAT
Staphylococcus carnosus subsp. carnosus TM300	Sca_1497	-59	5.3	TAGCGAACAAGTGTTCGTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP0868	-51	5.6	AATAGAACGTATGTTCGTAT
Macrococcus caseolyticus JCSC5402	MCCL_1665	-34	5.4	AACAGAACGTACGTTCGTAT

Position: -127 Score: 5.1 Sequence: AACAGAACGTATGTTCTGTT Locus tag: SE1627
	SE1627	-127	5.1	AACAGAACGTATGTTCTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1749
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315	SA1749	-133	5.7	AACAGAACATATGTTCGTAT
Staphylococcus capitis SK14	STACA0001_1989	-125	5.3	TATAGAACATATGTTCGCTA
Staphylococcus epidermidis ATCC 12228	SE1627	-127	5.1	AACAGAACGTATGTTCTGTT
Staphylococcus haemolyticus JCSC1435	SH1018	-129	5.9	AAACGAACAAATGTTCGCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP0853	-135	5.1	AACAGAACGTGTGTTCGTAT

Position: -66 Score: 5.1 Sequence: GTACGAAAGTATGTTCGCAT Locus tag: SE1762
	SE1762	-66	5.1	GTACGAAAGTATGTTCGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1975
Ortholog function: predicted membrane-bound hydrolase
Staphylococcus aureus subsp. aureus N315	SA1975	-66	4.9	ACCCGAAAATATGTTCGTGT
Staphylococcus capitis SK14	STACA0001_1306	-65	5.2	ACACGAAAGTATGTTCGCTT
Staphylococcus epidermidis ATCC 12228	SE1762	-66	5.1	GTACGAAAGTATGTTCGCAT
Staphylococcus carnosus subsp. carnosus TM300	Sca_1672	-68	5.1	GACCGAAAATATGTTCGTTT
Staphylococcus haemolyticus JCSC1435	SH0869	-66	5.2	CACCGAAAATATGTTCGTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	SSP0715	-66	5.3	TTACGAAAGTATGTTCGCAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of LexA regulog to Staphylococcus epidermidis ATCC 12228

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --