Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HisR regulog to Staphylococcus capitis SK14

Reference regulog properties
Source regulog: HisR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: TrpR
Regulation mode: repressor
Biological process: Histidine biosynthesis
Effector: Histidine
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus capitis SK14
Orthologous TF(s) STACA0001_1960
Regulated genes 3
Built upon 24 sites [see more]
Predicted regulatory interactions in Staphylococcus capitis SK14
Locus tag Position Score Sequence
Position: -39
Score: 4.9
Sequence: TACTTTAGTTCGATAGAGTG
Locus tag: STACA0001_0183
STACA0001_0183 -39 4.9 TACTTTAGTTCGATAGAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yuiF
Ortholog function: Histidine permease
Staphylococcus aureus subsp. aureus N315 SA0804 -38 5 CGCTTTAGTTCGATAGAGCG
Staphylococcus capitis SK14 STACA0001_0183 -39 4.9 TACTTTAGTTCGATAGAGTG
Staphylococcus epidermidis ATCC 12228 SE0637 -37 4.9 TACTTTAGTTCGATAGAGTG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0548 -37 4.2 TGCTTTAGTTCGATAACGTA
Staphylococcus haemolyticus JCSC1435 SH2008 -37 4.9 TACTTTAGTTCGGTAGAGAG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1832 -38 4.5 TACTTTAGTTCGATAACGTG
Macrococcus caseolyticus JCSC5402 MCCL_0570 -47 4.2 TACTTTAGTATGCTAATATA
Position: -30
Score: 5.6
Sequence: CACTTTAGCGCTTTAAAGGG
Locus tag: STACA0001_1477
STACA0001_1477 -30 5.6 CACTTTAGCGCTTTAAAGGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0417
Ortholog function: putative sodium-dependent transporter
Staphylococcus aureus subsp. aureus N315 SA0417 -27 5.5 CGCTTTAACGCTTTAAAGGA
Staphylococcus capitis SK14 STACA0001_1477 -30 5.6 CACTTTAGCGCTTTAAAGGG
Staphylococcus epidermidis ATCC 12228 SE2326 -108 5.6 CACTTTAGCGCTTTAAAGGG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0085 -143 5.7 CGCTTTAACGCTTTAAAGTA
Staphylococcus haemolyticus JCSC1435 SH2552 -108 5.9 CGCTTTAACGCGTTAAAGGG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2298 -47 5.1 CGCTTTAACGCAATAAAGCT
Macrococcus caseolyticus JCSC5402 MCCL_0041 -33 5.4 CACTTTACAGCGTTAAAACG
Position: -60
Score: 5.1
Sequence: CACTTTAACTAATTAGTACG
Locus tag: STACA0001_1960
STACA0001_1960 -60 5.1 CACTTTAACTAATTAGTACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisR
Ortholog function: Predicted histidine repressor, TrpR family
Staphylococcus aureus subsp. aureus N315 SA1723 -62 5.2 CACTTTAATAGATTAATGCG
Staphylococcus capitis SK14 STACA0001_1960 -60 5.1 CACTTTAACTAATTAGTACG
Staphylococcus epidermidis ATCC 12228 SE1592 -60 5 CACTTTAACGAATTAGTAAG
Staphylococcus carnosus subsp. carnosus TM300 Sca_1481 -60 5.1 CACTTTAACGTATTAGTACG
Staphylococcus haemolyticus JCSC1435 SH1044 -65 5.4 CACTTTAACTATTTAATGCG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0883 -61 5.1 CACTTTAATGTACTAATACG
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