Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BirA regulog to Staphylococcus capitis SK14

Reference regulog properties
Source regulog: BirA - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus capitis SK14
Orthologous TF(s) STACA0001_1704
Regulated genes 3
Built upon 21 sites [see more]
Predicted regulatory interactions in Staphylococcus capitis SK14
Locus tag Position Score Sequence
Position: -70
Score: 7.8
Sequence: TATGTAAACTTTTTATTTCTTAAAGTTTACATT
Locus tag: STACA0001_1211
STACA0001_1211 -70 7.8 TATGTAAACTTTTTATTTCTTAAAGTTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY
Ortholog function: biotin transporter BioY
Staphylococcus aureus subsp. aureus N315 SA2077 -75 7.5 ATTGTAAACTTTTCATTTCTTAAAGTTTACAAT
Staphylococcus capitis SK14 STACA0001_1211 -70 7.8 TATGTAAACTTTTTATTTCTTAAAGTTTACATT
Staphylococcus epidermidis ATCC 12228 SE1856 -70 6.9 ATTGTAAACTTTCCATTCATAAAAGTTTACAAG
Staphylococcus carnosus subsp. carnosus TM300 Sca_1775 -75 7.3 AATGTAAACTTTTAGTAAATTCAAGTTAACAAT
Staphylococcus haemolyticus JCSC1435 SH0770 -69 8.2 AATGTAAACTTTTTATTTTATAAAGTTTACATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0625 -67 8.1 AATGTAAACTTTTTATTTTTTAAAGTTTACATT
Macrococcus caseolyticus JCSC5402 MCCL_0134 -75 6.7 ATTGTTAACTTTTTGTACTAAAAGGTTAACGAA
Position: -43
Score: 7.2
Sequence: AATGTTAACATATTTATAAATATAGTTTACATA
Locus tag: STACA0001_0458
STACA0001_0458 -43 7.2 AATGTTAACATATTTATAAATATAGTTTACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfT
Ortholog function: putative long chain fatty acid-CoA ligase
Staphylococcus aureus subsp. aureus N315 SA0533 -48 7.1 AATGTTAACAAGATGTATTTTAAAGTTTACATT
Staphylococcus capitis SK14 STACA0001_0458 -43 7.2 AATGTTAACATATTTATAAATATAGTTTACATA
Staphylococcus epidermidis ATCC 12228 SE0344 -44 7.1 AATGTAAACATAATTATATAAAGTGTTTACAAA
Staphylococcus haemolyticus JCSC1435 SH2418 -55 7.6 AATGTTAACATAATATAAAATAAAGTTAACATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2146 -49 6.6 AATGTTAACATATTTGTTATGAAGGTTAACAAA
Position: -87
Score: 8
Sequence: AATGTAAACTTATAAATATATAAAGTTTACATT
Locus tag: STACA0001_0034
STACA0001_0034 -87 8 AATGTAAACTTATAAATATATAAAGTTTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: biotin synthase
Staphylococcus aureus subsp. aureus N315 SA2213 -55 7.9 AATGTAAACTTATTAATTATAAAAGTTTACATT
Staphylococcus capitis SK14 STACA0001_0034 -87 8 AATGTAAACTTATAAATATATAAAGTTTACATT
Staphylococcus epidermidis ATCC 12228 SE0234 -110 7.9 AATGTAAACTTATAAATATATAAAGTTTACAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2002 -63 7.4 AATGTTAACTATATAAAAAAATAAGTTAACAAT
Staphylococcus haemolyticus JCSC1435 SH0269 -75 8 AATGTAAACTTATTTATATATAAAGTTTACATT
Macrococcus caseolyticus JCSC5402 MCCL_0376 -76 6.8 ATTGTTAACTTATATTCAAAATTAGTTTACAAT
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