Propagation of SO3494 regulog to Shewanella frigidimarina NCIMB 400
| Source regulog: | SO3494 - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella frigidimarina NCIMB 400 |
| Orthologous TF(s) | Sfri_3984 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -334
Score: 6.3 Sequence: TTTATACCAATCGGTACAAA
Position: -262
Score: 6.3 Sequence: TTTGTACCGATTGGTATTAA
Locus tag: Sfri_3984
|
||||
| Sfri_3984 | -334 | 6.3 | TTTATACCAATCGGTACAAA | |
| -262 | 6.3 | TTTGTACCGATTGGTATTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3494 | ||||
| Ortholog function: Transcriptional regulator, TetR family | ||||
| Shewanella oneidensis MR-1 | SO_3494 | -273 | 6.2 | TAAATACCGATTGGTAAAAA |
| Shewanella putrefaciens CN-32 | Sputcn32_2793 | -339 | 6 | TAAATACCGACTGGTAAAAA |
| -266 | 5.9 | TATGTACCGACTGGTATTAA | ||
| Shewanella sp W3-18-1 | Sputw3181_1219 | -339 | 6 | TAAATACCGACTGGTAAAAA |
| -266 | 5.9 | TATGTACCGACTGGTATTAA | ||
| Shewanella sp ANA-3 | Shewana3_1076 | -285 | 6 | TAAATACCGACTGGTAAAAA |
| -213 | 5.2 | TTTGTACCGATGAGTATTTA | ||
| Shewanella sp MR-4 | Shewmr4_1072 | -289 | 6 | TAAATACCGACTGGTAAAAA |
| -216 | 5.2 | TTTGTACCGATAAGTATTTA | ||
| Shewanella sp MR-7 | Shewmr7_1144 | -288 | 6.2 | TAAATACCGATTGGTAAAAA |
| -215 | 5.2 | TTTGTACCGATAAGTATTTA | ||
| Shewanella baltica OS155 | Sbal_3183 | -502 | 6.2 | TATGTACCGATTGGTATTAA |
| Shewanella frigidimarina NCIMB 400 | Sfri_3984 | -334 | 6.3 | TTTATACCAATCGGTACAAA |
| -262 | 6.3 | TTTGTACCGATTGGTATTAA | ||
|
Position: -169
Score: 6.3 Sequence: TTAATACCAATCGGTACAAA
Position: -97
Score: 6.3 Sequence: TTTGTACCGATTGGTATAAA
Locus tag: Sfri_3985
|
||||
| Sfri_3985 | -169 | 6.3 | TTAATACCAATCGGTACAAA | |
| -97 | 6.3 | TTTGTACCGATTGGTATAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mexE | ||||
| Ortholog function: RND multidrug efflux membrane fusion protein MexE | ||||
| Shewanella oneidensis MR-1 | SO_3493 | 99 | 6.2 | TTTtTACCAATCGGTATttA |
| Shewanella putrefaciens CN-32 | Sputcn32_2792 | -170 | 5.9 | TTAATACCAGTCGGTACATA |
| -97 | 6 | TTTTTACCAGTCGGTATTTA | ||
| Shewanella sp W3-18-1 | Sputw3181_1220 | -170 | 5.9 | TTAATACCAGTCGGTACATA |
| -97 | 6 | TTTTTACCAGTCGGTATTTA | ||
| Shewanella sp ANA-3 | Shewana3_1077 | -166 | 5.2 | TAAATACTCATCGGTACAAA |
| -94 | 6 | TTTTTACCAGTCGGTATTTA | ||
| Shewanella sp MR-4 | Shewmr4_1073 | -166 | 5.2 | TAAATACTTATCGGTACAAA |
| -93 | 6 | TTTTTACCAGTCGGTATTTA | ||
| Shewanella sp MR-7 | Shewmr7_1145 | -166 | 5.2 | TAAATACTTATCGGTACAAA |
| -93 | 6.2 | TTTTTACCAATCGGTATTTA | ||
| Shewanella baltica OS155 | Sbal_3182 | -145 | 6.2 | TTAATACCAATCGGTACATA |
| -72 | 6 | TTTTTACCAGTCGGTATTTA | ||
| Shewanella denitrificans OS217 | Sden_3079 | -119 | 5.8 | AAATTACCAATCGGTACAAA |
| -70 | 5.2 | ATCATACCGACCGGTACAAA | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_3985 | -169 | 6.3 | TTAATACCAATCGGTACAAA |
| -97 | 6.3 | TTTGTACCGATTGGTATAAA | ||