Propagation of NmlR regulog to Shewanella frigidimarina NCIMB 400
| Source regulog: | NmlR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | activator |
| Biological process: | Carbonyl stress response |
| Effector: | Diamide |
| Phylum: | Proteobacteria/Gamma |
| Propagated regulon: | |
| Target genome | Shewanella frigidimarina NCIMB 400 |
| Orthologous TF(s) | Sfri_3872 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -58
Score: 6.8 Sequence: CTTAGAGTTAACTCTAAC
Locus tag: Sfri_3873
|
||||
| Sfri_3873 | -58 | 6.8 | CTTAGAGTTAACTCTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pcaC | ||||
| Ortholog function: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) | ||||
| Shewanella oneidensis MR-1 | SO_0083 | -60 | 6.8 | CTTAGAGCTAACTCTAAG |
| Shewanella sp MR-4 | Shewmr4_0089 | -57 | 6.8 | CTTAGAGTGAACTCTAAG |
| Shewanella baltica OS155 | Sbal_4266 | -58 | 7.1 | CTTAGAGTTAACTCTAAG |
| Shewanella frigidimarina NCIMB 400 | Sfri_3873 | -58 | 6.8 | CTTAGAGTTAACTCTAAC |
| Shewanella woodyi ATCC 51908 | Swoo_4049 | -57 | 7.1 | CTTAGAGTTAACTCTAAG |