Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AlgR regulog to Shewanella frigidimarina NCIMB 400

Reference regulog properties
Source regulog: AlgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Alginate utilization
Effector: Glucuronate; Galacturonate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella frigidimarina NCIMB 400
Orthologous TF(s) Sfri_3102
Regulated genes 1
Built upon 2 sites [see more]
Predicted regulatory interactions in Shewanella frigidimarina NCIMB 400
Locus tag Position Score Sequence
Position: -192
Score: 5.6
Sequence: AAATTGTTTTACCAATTA
Locus tag: Sfri_3102
Sfri_3102 -192 5.6 AAATTGTTTTACCAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: algR
Ortholog function: Alginate utilization operon transcriptional repressor, AlgR
Shewanella frigidimarina NCIMB 400 Sfri_3102 -192 5.6 AAATTGTTTTACCAATTA