Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of XltR regulog to Shewanella pealeana ATCC 700345

Reference regulog properties
Source regulog: XltR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Xylitol utilization
Effector: Xylitol
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella pealeana ATCC 700345
Orthologous TF(s) Spea_2287
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Shewanella pealeana ATCC 700345
Locus tag Position Score Sequence
Position: -204
Score: 6.8
Sequence: AAATGTTATCGATAACATTT
Locus tag: Spea_2286
Spea_2286 -204 6.8 AAATGTTATCGATAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xltF
Ortholog function: Xylitol dehydrogenase (EC 1.1.1.9)
Shewanella pealeana ATCC 700345 Spea_2286 -204 6.8 AAATGTTATCGATAACATTT
-42 5.9 TAATGACATCGATAACATTG
Shewanella halifaxensis HAW-EB4 Shal_2008 -206 6.3 AAATGTTATCGATGTCATTT
-42 6 TAATGACATCGATAACATAA
Position: -147
Score: 6.8
Sequence: AAATGTTATCGATAACATTT
Locus tag: Spea_2287
Spea_2287 -147 6.8 AAATGTTATCGATAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xltR
Ortholog function: Transcriptional regulator of xylitol utilization, LacI family
Shewanella pealeana ATCC 700345 Spea_2287 -309 5.9 CAATGTTATCGATGTCATTA
-147 6.8 AAATGTTATCGATAACATTT
Shewanella halifaxensis HAW-EB4 Shal_2007 -312 6 TTATGTTATCGATGTCATTA
-148 6.3 AAATGACATCGATAACATTT
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