Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DeoR regulog to Shewanella pealeana ATCC 700345

Reference regulog properties
Source regulog: DeoR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nucleoside utilization
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella pealeana ATCC 700345
Orthologous TF(s) Spea_3786
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Shewanella pealeana ATCC 700345
Locus tag Position Score Sequence
Position: -72
Score: 5.5
Sequence: TGCGGACTTATGTCCTCT
Locus tag: Spea_3784
Spea_3784 -72 5.5 TGCGGACTTATGTCCTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoD
Ortholog function: Purine nucleoside phosphorylase (EC 2.4.2.1)
Shewanella oneidensis MR-1 SO_2719 -73 6 TCCGGACTTTAGTCCTAA
Shewanella putrefaciens CN-32 Sputcn32_1657 -73 6 TCCGGACTTTAGTCCTAA
Shewanella sp W3-18-1 Sputw3181_2368 -73 6 TCCGGACTTTAGTCCTAA
Shewanella sp ANA-3 Shewana3_2503 -73 5.8 AGCGGACTTTAGTCCTAA
Shewanella pealeana ATCC 700345 Spea_3784 -72 5.5 TGCGGACTTATGTCCTCT
Shewanella halifaxensis HAW-EB4 Shal_3869 -72 5.5 TGCGGACTAATGTCCTCT
Shewanella piezotolerans WP3 swp_0461 -72 5.5 TGCGGACTTATGTCCTCT
Shewanella sediminis HAW-EB3 Ssed_3271 -93 5.8 TGCGGACTTTTGTCCTAA
Shewanella woodyi ATCC 51908 Swoo_3422 -116 5.3 TGCGGACTTTTGTCCTTA
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