Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SO0734 regulog to Shewanella sp W3-18-1

Reference regulog properties
Source regulog: SO0734 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: PadR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sp W3-18-1
Orthologous TF(s) Sputw3181_3480
Regulated genes 1
Built upon 4 sites [see more]
Predicted regulatory interactions in Shewanella sp W3-18-1
Locus tag Position Score Sequence
Position: -75
Score: 10
Sequence: TTACTGTGTG-(11)-TTGCTGTGTA
Locus tag: Sputw3181_3480
Sputw3181_3480 -75 10 TTACTGTGTG-(11)-TTGCTGTGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0734
Ortholog function: Transcriptional regulator, PadR family
Shewanella oneidensis MR-1 SO_0734 -74 10.4 TTACTGTGTG-(11)-TTGCTGTGTG
Shewanella putrefaciens CN-32 Sputcn32_0690 -61 10.4 TTACTGTGTG-(11)-TTGCTGTGTG
Shewanella sp W3-18-1 Sputw3181_3480 -75 10 TTACTGTGTG-(11)-TTGCTGTGTA
Shewanella baltica OS155 Sbal_3696 -75 10.4 TTACTGTGTG-(11)-TTGCTGTGTG
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