Regulog SO0734 - Shewanellaceae
| Regulator type: | Transcription factor |
| Regulator family: | PadR |
| Regulation mode: | repressor |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Shewanellaceae
- By TF family - PadR
| Genome | Genes | Operons |
|---|---|---|
| Shewanella oneidensis MR-1 | 2 | 1 |
| Shewanella putrefaciens CN-32 | 2 | 1 |
| Shewanella sp W3-18-1 | 2 | 1 |
| Shewanella sp ANA-3 | ||
| Shewanella sp MR-4 | ||
| Shewanella sp MR-7 | ||
| Shewanella baltica OS155 | 2 | 1 |
| Shewanella denitrificans OS217 | ||
| Shewanella frigidimarina NCIMB 400 | ||
| Shewanella amazonensis SB2B | ||
| Shewanella loihica PV-4 | ||
| Shewanella pealeana ATCC 700345 | ||
| Shewanella halifaxensis HAW-EB4 | ||
| Shewanella piezotolerans WP3 | ||
| Shewanella sediminis HAW-EB3 | ||
| Shewanella woodyi ATCC 51908 |
| Genes | Function | ||||||||||||||||
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| CRON 1. | |||||||||||||||||
| SO0734 |
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Shewanella oneidensis MR-1 Site: position = -74 score = 10.4253 sequence = TTACTGTGTG-(11)-TTGCTGTGTG Gene: SO_0734: Transcriptional regulator, PadR family |
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Shewanella putrefaciens CN-32 Site: position = -61 score = 10.4253 sequence = TTACTGTGTG-(11)-TTGCTGTGTG Gene: Sputcn32_0690: Transcriptional regulator, PadR family |
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Shewanella sp W3-18-1 Site: position = -75 score = 10.0144 sequence = TTACTGTGTG-(11)-TTGCTGTGTA Gene: Sputw3181_3480: Transcriptional regulator, PadR family |
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Shewanella baltica OS155 Site: position = -75 score = 10.4253 sequence = TTACTGTGTG-(11)-TTGCTGTGTG Gene: Sbal_3696: Transcriptional regulator, PadR family |
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Transcriptional regulator, PadR family |
| SO0735 |
Gene: SO_0735: hypothetical inner membrane protein |
Gene: Sputcn32_0691: hypothetical inner membrane protein |
Gene: Sputw3181_3479: hypothetical inner membrane protein |
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Gene: Sbal_3695: hypothetical inner membrane protein |
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hypothetical inner membrane protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |