Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SO2282 regulog to Shewanella oneidensis MR-1

Reference regulog properties
Source regulog: SO2282 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode: repressor
Biological process: Amino acid efflux
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella oneidensis MR-1
Orthologous TF(s) SO2282
Regulated genes 1
Built upon 23 sites [see more]
Predicted regulatory interactions in Shewanella oneidensis MR-1
Locus tag Position Score Sequence
Position: -83
Score: 6.5
Sequence: ATATTGTACGCATACAATTA
Locus tag: SO2282
SO2282 -83 6.5 ATATTGTACGCATACAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2282
Ortholog function: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
Shewanella oneidensis MR-1 SO_2282 -83 6.5 ATATTGTACGCATACAATTA
Shewanella putrefaciens CN-32 Sputcn32_2134 -83 6.3 TAATTGTATGCATACATTGT
Shewanella sp W3-18-1 Sputw3181_1877 -98 6.3 TAATTGTATGCATACATTGT
Shewanella sp ANA-3 Shewana3_2266 -59 6.6 AAATTGTACGCATACAATAT
Shewanella sp MR-4 Shewmr4_1753 -82 6.6 AAATTGTACGCATACAATAT
Shewanella sp MR-7 Shewmr7_1833 -83 6.6 AAATTGTACGCATACAATAT
Shewanella baltica OS155 Sbal_2383 -83 6.6 AAATTGTATGCATACATTTA
Shewanella amazonensis SB2B Sama_2016 -87 6.4 AAATTGTATGGATACAATAA
Shewanella pealeana ATCC 700345 Spea_2527 -86 6 GAATTGTATGAGTACAATAC
Shewanella halifaxensis HAW-EB4 Shal_1726 -86 5.7 CAATTGTATGCATACAAAAA
Shewanella piezotolerans WP3 swp_1877 -20 6.4 TTATTGTACGCATACAATTA
Shewanella woodyi ATCC 51908 Swoo_1966 -85 6 AAATTGTACACATACAATAA
© 2009-2020 RegPrecise