Propagation of BglR regulog to Shewanella woodyi ATCC 51908
| Source regulog: | BglR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Beta-glucosides utilization |
| Effector: | Beta-glucoside |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella woodyi ATCC 51908 |
| Orthologous TF(s) | Swoo_1145 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -109
Score: 6.5 Sequence: AATGTAAGCGCTTACAAT
Locus tag: Swoo_1144
|
||||
| Swoo_1144 | -109 | 6.5 | AATGTAAGCGCTTACAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: omp(Bgl) | ||||
| Ortholog function: Predicted beta-glucoside specific TonB-dependent outer membrane receptor | ||||
| Shewanella frigidimarina NCIMB 400 | Sfri_1313 | -304 | 6.3 | AAAGAAAGCGCTTACATT |
| -143 | 6.8 | TATGTAAGCGCTTACATT | ||
| Shewanella piezotolerans WP3 | swp_1631 | -108 | 5.5 | TGTGTAAGCGCTTACAAA |
| -63 | 6.3 | TTTGTAAGCGCTTACATT | ||
| Shewanella woodyi ATCC 51908 | Swoo_1144 | -109 | 6.5 | AATGTAAGCGCTTACAAT |
|
Position: -199
Score: 6.4 Sequence: GATGTAAGCGCTTTCATT
Locus tag: Swoo_1147
|
||||
| Swoo_1147 | -199 | 6.4 | GATGTAAGCGCTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglA1 | ||||
| Ortholog function: Cytoplasmic beta-glucosidase (EC 3.2.1.21) | ||||
| Shewanella baltica OS155 | Sbal_1131 | -147 | 6.9 | AATGTAAGCGCTTTCATT |
| Shewanella denitrificans OS217 | Sden_2607 | -177 | 6.9 | AATGTAAGCGCTTTCATT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1316 | -176 | 6.9 | AATGTAAGCGCTTTCATT |
| Shewanella amazonensis SB2B | Sama_1402 | -134 | 6.9 | AATGTAAGCGCTTTCATT |
| Shewanella piezotolerans WP3 | swp_1634 | -294 | 6.9 | AATGTAAGCGCTTTCATT |
| -233 | 6.9 | AATGTAAGCGCTTTCATT | ||
| Shewanella woodyi ATCC 51908 | Swoo_1147 | -199 | 6.4 | GATGTAAGCGCTTTCATT |
|
Position: -127
Score: 6.4 Sequence: AATGAAAGCGCTTACATC
Locus tag: Swoo_1148
|
||||
| Swoo_1148 | -127 | 6.4 | AATGAAAGCGCTTACATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glcP | ||||
| Ortholog function: Predicted glucose transporter in beta-glucoside utilization gene cluster | ||||
| Shewanella baltica OS155 | Sbal_1132 | -138 | 6.9 | AATGAAAGCGCTTACATT |
| Shewanella denitrificans OS217 | Sden_2606 | -195 | 6.9 | AATGAAAGCGCTTACATT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1317 | -224 | 6.9 | AATGAAAGCGCTTACATT |
| Shewanella woodyi ATCC 51908 | Swoo_1148 | -127 | 6.4 | AATGAAAGCGCTTACATC |