Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Shewanella amazonensis SB2B

Reference regulog properties
Source regulog: FadR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella amazonensis SB2B
Orthologous TF(s) Sama_1924
Regulated genes 5
Built upon 101 sites [see more]
Predicted regulatory interactions in Shewanella amazonensis SB2B
Locus tag Position Score Sequence
Position: -78
Score: 5.3
Sequence: AACTGGCCAGACCTGTT
Locus tag: Sama_0127
Sama_0127 -78 5.3 AACTGGCCAGACCTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4716
Ortholog function: Acetyltransferase, GNAT family
Shewanella oneidensis MR-1 SO_4716 -92 5.3 AACTGGCCAGACCTGTT
Shewanella putrefaciens CN-32 Sputcn32_3876 -92 5.3 AACTGGCCAGACCTGTT
Shewanella sp W3-18-1 Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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