Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CueR regulog to Shewanella amazonensis SB2B

Reference regulog properties
Source regulog: CueR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator (repressor)
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Proteobacteria/Gamma
Propagated regulon:
Target genome Shewanella amazonensis SB2B
Orthologous TF(s) Sama_1785
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Shewanella amazonensis SB2B
Locus tag Position Score Sequence
Position: -67
Score: 5.5
Sequence: ACCTTCCCATAATGGCAAGGT
Locus tag: Sama_1786
Sama_1786 -67 5.5 ACCTTCCCATAATGGCAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA
Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4)
Shewanella denitrificans OS217 Sden_3691 -61 5.1 ACCTTACCATGATGGCAAGCT
Shewanella amazonensis SB2B Sama_1786 -67 5.5 ACCTTCCCATAATGGCAAGGT
Position: -114
Score: 5.5
Sequence: ACCTTGCCATTATGGGAAGGT
Locus tag: Sama_1787
Sama_1787 -114 5.5 ACCTTGCCATTATGGGAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copZ
Ortholog function: Copper chaperone
Shewanella amazonensis SB2B Sama_1787 -114 5.5 ACCTTGCCATTATGGGAAGGT
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