Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Marinobacter sp. ELB17

Reference regulog properties
Source regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Propagated regulon:
Target genome Marinobacter sp. ELB17
Orthologous TF(s) MELB17_03500
Regulated genes 5
Built upon 505 sites [see more]
Predicted regulatory interactions in Marinobacter sp. ELB17
Locus tag Position Score Sequence
Position: -128
Score: 5.2
Sequence: TATTGCAAATCATTCTCATTG
Position: -99
Score: 5
Sequence: TATTGATATAAATTATTATTT
Locus tag: MELB17_06629
MELB17_06629 -128 5.2 TATTGCAAATCATTCTCATTG
-99 5 TATTGATATAAATTATTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_0811
Ortholog function: Imelysin peptidase family lipoprotein
Shewanella denitrificans OS217 Sden_0722 -74 5.8 TAATGCAAATTGTTATCATTT
Shewanella frigidimarina NCIMB 400 Sfri_0811 -78 5.6 TAATGCGAATCGTTATCAATT
Shewanella loihica PV-4 Shew_0676 -77 6 TAATGCAAATTATTCTCATTT
Shewanella pealeana ATCC 700345 Spea_0671 -100 5.7 TAATGTAAATCATTCTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3527 -100 5.7 TAATGTAAATCATTCTCATTT
Shewanella piezotolerans WP3 swp_4048 -86 5.8 TAATGCAAATCGTTCTCATTT
Shewanella sediminis HAW-EB3 Ssed_3792 -76 5.1 TAATGCAAACGATTCGTATTT
Shewanella woodyi ATCC 51908 Swoo_0791 -79 5.8 TAATGAAAACGATTCGCATTT
Position: -46
Score: 5.7
Sequence: AAATAGGAATGATTATCATTT
Locus tag: MELB17_13212
MELB17_13212 -46 5.7 AAATAGGAATGATTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_0585
Ortholog function: Putative siderophore biosynthesis protein, HpcH/HpaI aldolase family
Shewanella denitrificans OS217 Sden_0585 -69 5.3 AAATGATAATGAAAATCATTA
-63 5 TAATGAAAATCATTACCAGTC
Shewanella piezotolerans WP3 swp_0084 -206 5.6 AAATGATAATTATTACGATTT
-46 5 AAATGAGAACAATTGGCATCC
© 2009-2020 RegPrecise