Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Crp regulog to Teredinibacter turnerae T7901

Reference regulog properties
Source regulog: Crp - Shewanellaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria
Propagated regulon:
Target genome Teredinibacter turnerae T7901
Orthologous TF(s) TERTU_3126, TERTU_3866
Regulated genes 19
Built upon 2713 sites [see more]
Predicted regulatory interactions in Teredinibacter turnerae T7901
Locus tag Position Score Sequence
Position: -4
Score: 4.5
Sequence: TAATGTGAAAGAAATCGCCTTA
Locus tag: TERTU_0394
TERTU_0394 -4 4.5 TAATGTGAAAGAAATCGCCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoB
Ortholog function: Ferrous iron transport protein B
Shewanella oneidensis MR-1 SO1784 -153 4 CATAGAGATTTTTGTCACATAA
Shewanella putrefaciens CN-32 Sputcn32_1481 -155 4.6 CATTGGGATTTTTATCACATAA
Shewanella sp W3-18-1 Sputw3181_2620 -155 4.6 CATTGGGATTTTTATCACATAA
Shewanella sp ANA-3 Shewana3_2670 -276 5 AAGTGTGATCTTGTTCTCACTT
-153 4.4 CATTGAGATTTTTGTCACATAA
Shewanella sp MR-4 Shewmr4_2504 -276 5 AAGTGTGATCTTGTTCTCACTT
-153 4.4 CATTGAGATTTTTGTCACATAA
Shewanella sp MR-7 Shewmr7_2572 -276 5 AAGTGTGATCTTGTTCTCACTT
-153 4.4 CATTGAGATTTTTGTCACATAA
Shewanella baltica OS155 Sbal_1595 -276 5 AAGCGTGATGTTGATCACGTTT
Shewanella denitrificans OS217 Sden_2414 -148 3.9 ATCTGCGGTATTTATCACATAA
Shewanella amazonensis SB2B Sama_1215 -228 3.8 AAGTGTGATGAGTGTCACGCCG
Shewanella loihica PV-4 Shew_2517 -245 5.2 ATATGTGATCTAGATCACGTTG
-155 4.2 GATTGAGATATCTGTCACATAA
Shewanella pealeana ATCC 700345 Spea_2690 -247 5.5 TTATGTGATGCGTATCACACTT
-158 4.2 AGTTGAGAGTTTTGTCACATAA
Shewanella halifaxensis HAW-EB4 Shal_2776 -279 4.7 AAGTGTGATCTGTGTCAAGTTT
-158 4.7 AGTTGAGATATTTATCACATAA
Shewanella piezotolerans WP3 swp_3270 -280 4.6 AAGCGTGATCTACGTCACACTG
-157 4.2 AGTTGAGAGATTTGTCACATAA
Shewanella sediminis HAW-EB3 Ssed_1532 -275 4.9 AAGTGTGATCTTGGTCACGCTA
-158 4.3 AGTTGAGACTTTTGTCACATAA
Shewanella woodyi ATCC 51908 Swoo_3122 -272 4.7 AATCGTGACTTATATCACTTAA
-157 4.2 AGTTGGGACTTTTGTCACATAA
Position: -247
Score: 4
Sequence: TATTTTGCCTTCCCTAACATAT
Locus tag: TERTU_2526
TERTU_2526 -247 4 TATTTTGCCTTCCCTAACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Shewanella putrefaciens CN-32 Sputcn32_2273 -66 3.8 TGCCGTGATTTATCTCCCAGTT
Shewanella sp W3-18-1 Sputw3181_1735 -66 3.8 TGCCGTGATTTATCTCCCAGTT
Shewanella baltica OS155 Sbal_2519 -66 3.8 TGCCGTGATTCACATCCCAGTT
Shewanella denitrificans OS217 Sden_2187 -274 3.7 TGGATTGATGCAAATTACAAAA
-186 3.8 AAGGGCGACAAACATCACAATT
Shewanella frigidimarina NCIMB 400 Sfri_2347 -74 4.1 ACGTGTGATGTAACTTACGTTA
-19 3.7 AAGTTTGAAAGGAATAACAATG
Shewanella amazonensis SB2B Sama_1423 -80 3.7 TTTTGTGACGACTGTCGCCGTG
Shewanella pealeana ATCC 700345 Spea_1784 -86 4.4 AACCGTGATCTGGATCACTGAT
Shewanella halifaxensis HAW-EB4 Shal_2493 -86 4.9 ATCTGTGATCTGGATCACCGAT
Shewanella piezotolerans WP3 swp_2955 -20 4.6 AACTGTGACCTAGTTCACGGAT
Shewanella sediminis HAW-EB3 Ssed_2818 -86 4.2 GATCGTGACCTGTGTCACAGTT
Shewanella woodyi ATCC 51908 Swoo_1833 -87 4.8 ATTTGTGATCTAAATCACGCCT