Propagation of SO3494 regulog to Shewanella sp MR-4

Reference regulog properties
Source regulog:	SO3494 - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Multidrug resistance
Effector:
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Shewanella sp MR-4
Orthologous TF(s)	Shewmr4_1072
Regulated genes	2

Built upon 31 sites [see more]

Predicted regulatory interactions in *Shewanella sp MR-4*
	Locus tag	Position	Score	Sequence
Position: -289 Score: 6 Sequence: TAAATACCGACTGGTAAAAA Locus tag: Shewmr4_1072
	Shewmr4_1072	-289	6	TAAATACCGACTGGTAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3494
Ortholog function: Transcriptional regulator, TetR family
Shewanella oneidensis MR-1	SO_3494	-273	6.2	TAAATACCGATTGGTAAAAA
Shewanella putrefaciens CN-32	Sputcn32_2793	-339	6	TAAATACCGACTGGTAAAAA
		-266	5.9	TATGTACCGACTGGTATTAA
Shewanella sp W3-18-1	Sputw3181_1219	-339	6	TAAATACCGACTGGTAAAAA
		-266	5.9	TATGTACCGACTGGTATTAA
Shewanella sp ANA-3	Shewana3_1076	-285	6	TAAATACCGACTGGTAAAAA
		-213	5.2	TTTGTACCGATGAGTATTTA
Shewanella sp MR-4	Shewmr4_1072	-289	6	TAAATACCGACTGGTAAAAA
		-216	5.2	TTTGTACCGATAAGTATTTA
Shewanella sp MR-7	Shewmr7_1144	-288	6.2	TAAATACCGATTGGTAAAAA
		-215	5.2	TTTGTACCGATAAGTATTTA
Shewanella baltica OS155	Sbal_3183	-502	6.2	TATGTACCGATTGGTATTAA
Shewanella frigidimarina NCIMB 400	Sfri_3984	-334	6.3	TTTATACCAATCGGTACAAA
		-262	6.3	TTTGTACCGATTGGTATTAA

Position: -93 Score: 6 Sequence: TTTTTACCAGTCGGTATTTA Locus tag: Shewmr4_1073
	Shewmr4_1073	-93	6	TTTTTACCAGTCGGTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mexE
Ortholog function: RND multidrug efflux membrane fusion protein MexE
Shewanella oneidensis MR-1	SO_3493	99	6.2	TTTtTACCAATCGGTATttA
Shewanella putrefaciens CN-32	Sputcn32_2792	-170	5.9	TTAATACCAGTCGGTACATA
		-97	6	TTTTTACCAGTCGGTATTTA
Shewanella sp W3-18-1	Sputw3181_1220	-170	5.9	TTAATACCAGTCGGTACATA
		-97	6	TTTTTACCAGTCGGTATTTA
Shewanella sp ANA-3	Shewana3_1077	-166	5.2	TAAATACTCATCGGTACAAA
		-94	6	TTTTTACCAGTCGGTATTTA
Shewanella sp MR-4	Shewmr4_1073	-166	5.2	TAAATACTTATCGGTACAAA
		-93	6	TTTTTACCAGTCGGTATTTA
Shewanella sp MR-7	Shewmr7_1145	-166	5.2	TAAATACTTATCGGTACAAA
		-93	6.2	TTTTTACCAATCGGTATTTA
Shewanella baltica OS155	Sbal_3182	-145	6.2	TTAATACCAATCGGTACATA
		-72	6	TTTTTACCAGTCGGTATTTA
Shewanella denitrificans OS217	Sden_3079	-119	5.8	AAATTACCAATCGGTACAAA
		-70	5.2	ATCATACCGACCGGTACAAA
Shewanella frigidimarina NCIMB 400	Sfri_3985	-169	6.3	TTAATACCAATCGGTACAAA
		-97	6.3	TTTGTACCGATTGGTATAAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of SO3494 regulog to Shewanella sp MR-4

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --