Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Moritella sp. PE36

Reference regulog properties
Source regulog: ArgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Moritella sp. PE36
Orthologous TF(s) PE36_07657
Regulated genes 12
Built upon 502 sites [see more]
Predicted regulatory interactions in Moritella sp. PE36
Locus tag Position Score Sequence
Position: -305
Score: 5
Sequence: ACTGAATATAATTGCACT
Position: -163
Score: 5.2
Sequence: TATGCATAATTATTCAGT
Locus tag: PE36_07657
PE36_07657 -305 5 ACTGAATATAATTGCACT
-163 5.2 TATGCATAATTATTCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argR
Ortholog function: Arginine metabolism transcriptional regulator ArgR
Shewanella oneidensis MR-1 SO_0769 -93 5.5 ATTGCATTTTTATTCAGT
Shewanella putrefaciens CN-32 Sputcn32_3220 -96 5.5 AGTGAATTTTTATTCAAC
Shewanella sp W3-18-1 Sputw3181_0721 -96 5.5 AGTGAATTTTTATTCAAC
Shewanella sp ANA-3 Shewana3_3510 -93 5.5 ATTGCATTTTTATTCAGT
Shewanella sp MR-4 Shewmr4_3340 -93 5.5 ATTGCATTTTTATTCAGT
Shewanella sp MR-7 Shewmr7_0613 -93 5.2 ACTGCATTTTTATTCATC
Shewanella baltica OS155 Sbal_0608 -96 5.5 AGTGAATTTTTATTCAAC
Shewanella denitrificans OS217 Sden_0825 -89 5.7 AGTGAATTTTTATTCACT
Shewanella frigidimarina NCIMB 400 Sfri_0640 -104 5.6 AATGAATTTTTATTCAAT
Shewanella amazonensis SB2B Sama_0671 -98 5.3 TCTGCATTTTTATTCACA
Shewanella loihica PV-4 Shew_0866 -95 5.1 CCTGAATTTTTATTCACA
Shewanella pealeana ATCC 700345 Spea_0849 -95 5.5 AATGAATTTTTATTCAGA
Shewanella halifaxensis HAW-EB4 Shal_0902 -95 5.5 AATGAATTTTTATTCACA
Shewanella piezotolerans WP3 swp_4101 -95 5.3 CATGAATTTTTATTCAAT
Shewanella sediminis HAW-EB3 Ssed_0951 -95 5.2 GTTGCATTTTTATTCATA
Shewanella woodyi ATCC 51908 Swoo_1001 -95 5 ATTGCATTCTTATTCATT
Position: -16
Score: 4.4
Sequence: TGTCAGTTATAATTCAAT
Locus tag: PE36_15175
PE36_15175 -16 4.4 TGTCAGTTATAATTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvA
Ortholog function: Threonine dehydratase biosynthetic (EC 4.3.1.19)
Shewanella oneidensis MR-1 SO_4344 -216 4.2 CGTGATTATTAAATCACA
Shewanella putrefaciens CN-32 Sputcn32_3611 -214 4.2 CGTGATTATTAAATCACA
Shewanella sp W3-18-1 Sputw3181_3751 -214 4.2 CGTGATTATTAAATCACA
Shewanella sp ANA-3 Shewana3_0359 -201 4.5 AGTGATTATTAAATCACA
Shewanella sp MR-4 Shewmr4_0365 -201 4.5 AGTGATTATTAAATCACA
Shewanella sp MR-7 Shewmr7_3661 -219 4.5 AGTGATTATTAAATCACA
Shewanella denitrificans OS217 Sden_3411 -153 4.6 AGTGATTATTAAGTCACA
Shewanella frigidimarina NCIMB 400 Sfri_0425 -202 4.6 AGTGATTATTAAGTCACA
Shewanella amazonensis SB2B Sama_3278 -157 4.5 AGTGATTATTAAATCACA
Shewanella loihica PV-4 Shew_0293 -166 4.5 AGTGATTATTAAATCACA
Shewanella pealeana ATCC 700345 Spea_0349 -181 4.2 CGTGATTATTAAATCACA
Shewanella halifaxensis HAW-EB4 Shal_3940 -193 4.2 CGTGATTATTAAATCACA
Shewanella piezotolerans WP3 swp_0363 -189 4.2 CGTGATTATTAAATCACA
Shewanella woodyi ATCC 51908 Swoo_0446 -190 4.2 CGTGATTATTAAATCACA
Position: -86
Score: 4.8
Sequence: GTTGAATGATCATTCAAA
Locus tag: PE36_11637
PE36_11637 -86 4.8 GTTGAATGATCATTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3392
Ortholog function: NADH-dependent flavin oxidoreductase, Oye family
Shewanella oneidensis MR-1 SO_3392 -84 4.6 ATTGAACAAACATTCAAA
-60 4.6 CTTGAATGATCATTCAAA
Shewanella putrefaciens CN-32 Sputcn32_2720 -84 4.5 TTTGAACAAACATTCAAA
-60 4.7 CTTGAATGTTCATTCAAA
-33 4 CTTGAATGCACATTCAAG
Shewanella sp W3-18-1 Sputw3181_1292 -84 4.5 TTTGAACAAACATTCAAA
-60 4.7 CTTGAATGTTCATTCAAA
-33 4 CTTGAATGCACATTCAAG
Shewanella sp ANA-3 Shewana3_1159 -84 4.5 TTTGAACAAACATTCAAA
-60 3.9 CTTGAATGATCGTTCAAA
-33 4 CTTGAATGCACATTCAAG
Shewanella sp MR-4 Shewmr4_1158 -84 4.5 TTTGAACAAACATTCAAA
-60 3.9 CTTGAATGATCGTTCAAA
Shewanella sp MR-7 Shewmr7_1229 -84 4.5 TTTGAACAAACATTCAAA
-60 3.9 CTTGAATGATCGTTCAAA
-33 4.2 CTTGAATGCATATTCAAG
Shewanella baltica OS155 Sbal_1249 -84 4.9 TTTGAATGAACATTCAAA
-33 4.2 CTTGAATGCATATTCAAG
Shewanella denitrificans OS217 Sden_1230 -81 4.7 TTTGAAAAATTATTCAAA
-58 4.2 CTTGAATGAATGTTCAAA
-31 4 CTTGAATGCACATTCAAG
Shewanella frigidimarina NCIMB 400 Sfri_1089 -61 4.4 CTTGAATGTGCATTCAAT
-33 4.2 CTTGAATGCATATTCAAG
Shewanella amazonensis SB2B Sama_2407 -85 4.5 TTTGAATGTATGTTCAAA
-61 4 CTTGAATGTATGTTCAAG
-34 3.7 TTTGAATGCCTGTTCAAA
Shewanella loihica PV-4 Shew_3098 -83 4.2 TTTGAATGAACGTTCAAA
Shewanella piezotolerans WP3 swp_0975 -83 4.5 TTTGAATGTTTGTTCAAA
-59 4.8 CTTGAATGATTATTCAAA
-32 4.4 CTTGAATGTTCATTCAAG
Shewanella sediminis HAW-EB3 Ssed_3644 -83 4.5 TTTGAATGTTTGTTCAAA
-59 3.9 CTTGAATGATCGTTCAAA
-32 4.4 CTTGAATGAACATTCAAG
Shewanella woodyi ATCC 51908 Swoo_4055 -83 4.5 TTTGAATGTTTGTTCAAA
-59 3.9 CTTGAATGATCGTTCAAA
-32 4.4 CTTGAATGAACATTCAAG
Position: -221
Score: 4.3
Sequence: ATTGTTTTTTTATGCATA
Position: -200
Score: 4.5
Sequence: GTTGCATAAAAATGTAAT
Position: -135
Score: 3.6
Sequence: AATGAATCGTTTTTCATG
Locus tag: PE36_14821
PE36_14821 -221 4.3 ATTGTTTTTTTATGCATA
-200 4.5 GTTGCATAAAAATGTAAT
-135 3.6 AATGAATCGTTTTTCATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Shewanella oneidensis MR-1 SO_0275 -327 3.6 ATTGAAATATTAAGTAGT
-249 4 TAAAAATATATATTCACA
-127 3.7 AGTGAATAAAATAACAAG
Shewanella putrefaciens CN-32 Sputcn32_3717 -192 4.2 TATGAAAATAAATTAAAA
-57 3.8 AGTGAATAAAATAACAAC
Shewanella sp W3-18-1 Sputw3181_3860 -193 4.2 TATGAAAATAAATTAAAA
-180 4 TAAAAATATATATTCACA
-57 4 AGTGAATAAAATAACAAT
Shewanella sp ANA-3 Shewana3_3905 -357 3.7 ACTGATTTTTCAGTCTTT
-327 4.4 ACTGAGTTATTAAGCAGT
-249 4 TAAAAATATATATTCACA
Shewanella sp MR-4 Shewmr4_3709 -327 4.4 ACTGAGTTATTAAGCAGT
-249 4 TAAAAATATATATTCACA
Shewanella sp MR-7 Shewmr7_0236 -327 4.4 ACTGAGTTATTAAGCAGT
-249 4 TAAAAATATATATTCACA
Shewanella baltica OS155 Sbal_4124 -471 4.2 ATTCAATATAAATGCGAA
-252 4 TAAAAATATATATTCACA
-130 3.8 AGTGAATAAAATAACAAC
Shewanella denitrificans OS217 Sden_0250 -235 4.3 AATAAATATGTATTCACA
-214 3.7 ATTGCATAACAATTTGAT
-145 4.3 ATCGAATATAAAAGCACA
Shewanella amazonensis SB2B Sama_0256 -241 3.7 AATAGATATTCATGCATA
Shewanella loihica PV-4 Shew_0202 -249 3.7 TAAAAATATCTATTCAAT
-228 3.5 ATTGCATAATTAGTTTGT
Shewanella pealeana ATCC 700345 Spea_0227 -266 3.8 CCCAAATATATATTCAAA
Shewanella halifaxensis HAW-EB4 Shal_4093 -267 4.5 CCTAAATATATATTCAAA
Shewanella piezotolerans WP3 swp_2055 -266 4.5 CCTAAATATATATTCAAA
Shewanella sediminis HAW-EB3 Ssed_4276 -256 4 GTAAAATATATATTCAAA
-235 3.5 ATTGCATAATTAGTTTGT
Shewanella woodyi ATCC 51908 Swoo_0329 -423 3.5 TTTGCATTCAAAACCAAG
-263 4 GTAAAATATATATTCAAA
Position: -125
Score: 3.6
Sequence: CATGAAAAACGATTCATT
Position: -60
Score: 4.5
Sequence: ATTACATTTTTATGCAAC
Position: -39
Score: 4.3
Sequence: TATGCATAAAAAAACAAT
Locus tag: PE36_14826
PE36_14826 -125 3.6 CATGAAAAACGATTCATT
-60 4.5 ATTACATTTTTATGCAAC
-39 4.3 TATGCATAAAAAAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: Acetylornithine deacetylase (EC 3.5.1.16)
Shewanella amazonensis SB2B Sama_0255 -50 3.7 ACTCTTTAATTATGCAAT
Shewanella loihica PV-4 Shew_0201 -53 4.2 TATGCAATAATATTGAAT
Shewanella pealeana ATCC 700345 Spea_0226 -27 3.8 TTTGAATATATATTTGGG
Shewanella halifaxensis HAW-EB4 Shal_4094 -122 3.8 ATTGAACATATATACTCT
-26 4.5 TTTGAATATATATTTAGG
Shewanella piezotolerans WP3 swp_2054 -143 3.4 AATACTTAATAATTGAAC
-27 4.5 TTTGAATATATATTTAGG
Shewanella sediminis HAW-EB3 Ssed_4277 -48 3.5 ACAAACTAATTATGCAAT
-27 4 TTTGAATATATATTTTAC
Shewanella woodyi ATCC 51908 Swoo_0328 -28 4 TTTGAATATATATTTTAC
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