Propagation of Fnr regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog:	Fnr - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:
Biological process:	Anaerobic metabolism
Effector:	Oxygen
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Alteromonadales bacterium TW-7
Orthologous TF(s)	ATW7_08414
Regulated genes	4

Built upon 541 sites [see more]

Predicted regulatory interactions in *Alteromonadales bacterium TW-7*
	Locus tag	Position	Score	Sequence
Position: -126 Score: 4.5 Sequence: TTAATCTAAATCAA Locus tag: ATW7_05229
	ATW7_05229	-126	4.5	TTAATCTAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Shewanella amazonensis SB2B	Sama_1371	-105	5.2	TTGATTTGGATCAA
Shewanella baltica OS155	Sbal_1490	-103	5.2	TTGATTTGGATCAA
Shewanella denitrificans OS217	Sden_2589	-153	4.5	GTGAATTAGATCAA
		-103	5.3	TTGATCCAGATCAA
Shewanella frigidimarina NCIMB 400	Sfri_1334	-166	4.6	GTGATCCAAATCAA
		-105	5.3	TTGATCTAAATCAA
Shewanella halifaxensis HAW-EB4	Shal_2887	-107	4.4	TTGATTCAGGTCAA
Shewanella oneidensis MR-1	SO1673	-293	4.3	TTGATGTAAATGAA
		-106	5.2	TTGATTTGGATCAA
Shewanella pealeana ATCC 700345	Spea_2787	-155	4.3	GTGATCTAGATCCT
		-104	5.3	TTGATTTAGATCAA
Shewanella piezotolerans WP3	swp_3395	-107	5.6	TTGATCTAGATCAA
Shewanella putrefaciens CN-32	Sputcn32_1392	-103	5.3	TTGATTTAGATCAA
Shewanella sediminis HAW-EB3	Ssed_1469	-154	3.8	GTGAGCTTGGTCAT
		-104	5.6	TTGATCTGGATCAA
Shewanella sp ANA-3	Shewana3_2775	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-4	Shewmr4_2601	-103	5.2	TTGATTTGGATCAA
Shewanella sp MR-7	Shewmr7_2668	-103	5.2	TTGATTTGGATCAA
Shewanella sp W3-18-1	Sputw3181_2709	-103	5.3	TTGATTTAGATCAA
Shewanella woodyi ATCC 51908	Swoo_3207	-154	4.1	GTGAGTTCGATCAA
		-104	5.2	TTGATTTGGATCAA

Position: -93 Score: 4.5 Sequence: TTGATATAGAACAA Locus tag: ATW7_08419
	ATW7_08419	-93	4.5	TTGATATAGAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uspE
Ortholog function: Universal stress protein E
Shewanella amazonensis SB2B	Sama_1800	-74	4.6	TTGATCTAAAACAA
Shewanella baltica OS155	Sbal_2210	-72	4.9	TTGATCTAGAACAA
Shewanella baltica OS155	Sbal_4496	-72	4.9	TTGATCTAGAACAA
Shewanella denitrificans OS217	Sden_1842	-69	4.2	TTGATATAGCTCAC
Shewanella frigidimarina NCIMB 400	Sfri_2019	-87	4.6	ATGATCTATCTCAA
Shewanella halifaxensis HAW-EB4	Shal_2206	-73	4.6	TTGATCTAAAACAA
Shewanella loihica PV-4	Shew_1994	-72	4.6	TTGATCTAAAACAA
Shewanella oneidensis MR-1	SO2355	-72	4.9	TTGATCTAGAACAA
Shewanella pealeana ATCC 700345	Spea_2223	-74	4.6	TTGATCTAAAACAA
Shewanella piezotolerans WP3	swp_2581	-71	4.6	TTGATCTAAAACAA
Shewanella putrefaciens CN-32	Sputcn32_1950	-72	4.9	TTGATCTAGAACAA
Shewanella sediminis HAW-EB3	Ssed_2220	-71	4.6	TTGATCTGAAACAA
Shewanella sp ANA-3	Shewana3_2116	-72	4.9	TTGATCTAGAACAA
Shewanella sp MR-4	Shewmr4_2015	-72	4.9	TTGATCTAGAACAA
Shewanella sp MR-7	Shewmr7_1960	-72	4.9	TTGATCTAGAACAA
Shewanella sp W3-18-1	Sputw3181_2055	-72	4.9	TTGATCTAGAACAA
Shewanella woodyi ATCC 51908	Swoo_2416	-70	4.9	TTGATCTAAAGCAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Alteromonadales bacterium TW-7

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --