Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BetI regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog: BetI - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Osmotic stress response
Effector: Betaine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonadales bacterium TW-7
Orthologous TF(s) ATW7_03162
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Alteromonadales bacterium TW-7
Locus tag Position Score Sequence
Position: -4
Score: 7
Sequence: TTTATTGAACGTTCAATTAA
Locus tag: ATW7_03162
ATW7_03162 -4 7 TTTATTGAACGTTCAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: betI
Ortholog function: glycine betaine biosynthesis transcriptional regulator, TetR family
Shewanella baltica OS155 Sbal_1323 -63 7 TGGATTGAACGTTCAATTAA
Shewanella denitrificans OS217 Sden_0713 -46 7.5 TTAATTGAACGTTCAATTAA
Shewanella frigidimarina NCIMB 400 Sfri_1948 -51 7.2 TTAATTGAGCGTTCAATTAA
Shewanella pealeana ATCC 700345 Spea_1009 -97 7.3 TTAATTGAACGTTCAATCAA
Shewanella halifaxensis HAW-EB4 Shal_1059 -96 7.3 TTAATTGAACGTTCAATCAA
Shewanella sediminis HAW-EB3 Ssed_1121 -73 7.5 TTAATTGAACGTTCAATTAA
Shewanella woodyi ATCC 51908 Swoo_1198 -83 7.5 TTAATTGAACGTTCAATTAA
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