Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Fur regulog to Marinobacter algicola DG893

Reference regulog properties
Source regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Propagated regulon:
Target genome Marinobacter algicola DG893
Orthologous TF(s) MDG893_04172
Regulated genes 8
Built upon 505 sites [see more]
Predicted regulatory interactions in Marinobacter algicola DG893
Locus tag Position Score Sequence
Position: -62
Score: 5.3
Sequence: TAATGCGAATTATTATCAGTA
Locus tag: MDG893_10031
MDG893_10031 -62 5.3 TAATGCGAATTATTATCAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_3851
Ortholog function: TonB-dependent siderophore receptor
Shewanella denitrificans OS217 Sden_0609 -101 5.3 AAACGCTAACAATTCTCATTA
Shewanella frigidimarina NCIMB 400 Sfri_3851 -309 5.8 AAATGAGAATAATTATCAAAA
Shewanella piezotolerans WP3 swp_0083 -206 5.6 AAATGATAATTATTACGATTT
-46 5 AAATGAGAACAATTGGCATCC
Position: -139
Score: 5.4
Sequence: GAATGAAAATGATTAACATTT
Locus tag: MDG893_10061
MDG893_10061 -139 5.4 GAATGAAAATGATTAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_0585
Ortholog function: Putative siderophore biosynthesis protein, HpcH/HpaI aldolase family
Shewanella denitrificans OS217 Sden_0585 -69 5.3 AAATGATAATGAAAATCATTA
-63 5 TAATGAAAATCATTACCAGTC
Shewanella piezotolerans WP3 swp_0084 -206 5.6 AAATGATAATTATTACGATTT
-46 5 AAATGAGAACAATTGGCATCC
Position: -49
Score: 5.6
Sequence: AAATGACAATAATTATCACTA
Locus tag: MDG893_14910
MDG893_14910 -49 5.6 AAATGACAATAATTATCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Shewanella oneidensis MR-1 SO0583 -55 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella putrefaciens CN-32 Sputcn32_3295 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp W3-18-1 Sputw3181_0646 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp ANA-3 Shewana3_0581 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp MR-4 Shewmr4_0582 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp MR-7 Shewmr7_3448 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella baltica OS155 Sbal_0542 -53 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella denitrificans OS217 Sden_3217 -99 5.7 CAATGATAACCGTTTTCATTT
Shewanella frigidimarina NCIMB 400 Sfri_3324 -76 5.7 CAATGATAACCGTTTTCATTT
Shewanella amazonensis SB2B Sama_3040 -59 5.5 TGATGAGAACGGTTTTTATTT
Shewanella pealeana ATCC 700345 Spea_3555 -58 5.8 CATTGAGAATCATTTTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3649 -58 5.5 CACTGAGAATCATTTTCATTT
Shewanella piezotolerans WP3 swp_0771 -86 5.3 GATTGATAACTATTCTCATCA
-57 5.6 CATTGAGAATCGTTTTCATTT
Position: -98
Score: 5.5
Sequence: CAATGAGAATTGTTAGCATTT
Locus tag: MDG893_17632
MDG893_17632 -98 5.5 CAATGAGAATTGTTAGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4423.1
Ortholog function: TonB-dependent ferric achromobactin receptor
Shewanella oneidensis MR-1 SO4423.1 -98 5.4 TAATAAAAATCGTTACCATTT
Shewanella putrefaciens CN-32 Sputcn32_0401 -97 5.6 TAACGAAAATCGTTATCATTT
Shewanella sp W3-18-1 Sputw3181_0255 -97 5.6 TAACGAAAATCGTTATCATTT
Shewanella sp ANA-3 Shewana3_0286 -98 5.5 CAATAAAAATCGTTATCATTT
Shewanella sp MR-4 Shewmr4_0286 -98 5.5 CAATAAAAATCGTTATCATTT
Shewanella sp MR-7 Shewmr7_3733 -98 5.5 CAATAAAAATCGTTATCATTT
Shewanella baltica OS155 Sbal_0298 -100 5.6 GAATAAAAATCGTTATCATTT
Shewanella frigidimarina NCIMB 400 Sfri_0392 -54 5.9 TAATGATAATGAATATCATTA
Shewanella amazonensis SB2B Sama_1394 -54 5 CATTGAGAGTAATTATCATTA
Shewanella loihica PV-4 Shew_1688 -72 4.9 ATATGATAATCTATATCATTC
Shewanella pealeana ATCC 700345 Spea_0977 -108 5.3 AAACACTAATCATTATCATTT
Shewanella piezotolerans WP3 swp_1134 -108 5.2 CAACAATAATCATTATCATTT
Shewanella sediminis HAW-EB3 Ssed_1496 -51 4.9 AATCGAGAATGGTTATCATCC
Shewanella woodyi ATCC 51908 Swoo_0587 -62 5.9 TAATGGGAATAATTATCATTT
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