Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing gnd gene

Properties
Regulog: UxaR - Thermotogales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Galacturonate utilization; Pectin utilization
Effector:
Phylum: Thermotogae
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Thermotoga maritima MSB8
Position: -25
Score: 6.43026
Sequence: TGAAACATCAAACATCT
Locus tag: TM0436
Name: aldH
Funciton: alcohol dehydrogenase, zinc-containing
Locus tag: TM0437
Name: pelB
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: TM0438
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Locus tag: TM0439
Name: uxaR
Funciton: Regulator of pectin and galacturonate utilization, GntR family
Locus tag: TM0440
Name: uxaE
Funciton: D-tagaturonate epimerase
Locus tag: TM0441
Name: uxuB2
Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
Locus tag: TM0442
Name: gntE
Funciton: novel D-mannonate-D-gluconate epimerase
Locus tag: TM0443
Name: gntK
Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK -25 6.4 TGAAACATCAAACATCT TM0436
Thermotoga naphthophila RKU-10
Position: -88
Score: 6.35322
Sequence: TAAAACATCACATATCT
Locus tag: Tnap_0217
Name: uxaP
Funciton: Predicted galacturonate TRAP transporter, substrate binding subunit
Locus tag: Tnap_0218
Name: uxaQ
Funciton: Predicted galacturonate TRAP transporter, small permease subunit
Locus tag: Tnap_0219
Name: uxaM
Funciton: Predicted galacturonate TRAP transporter, large permease subunit
Locus tag: Tnap_0220
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Locus tag: Tnap_0221
Name: uxaR
Funciton: Regulator of pectin and galacturonate utilization, GntR family
Locus tag: Tnap_0222
Name: uxaE
Funciton: D-tagaturonate epimerase
Locus tag: Tnap_0223
Name: uxuB2
Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
Locus tag: Tnap_0224
Name: gntE
Funciton: novel D-mannonate-D-gluconate epimerase
Locus tag: Tnap_0225
Name: gntK
Funciton: Gluconokinase (EC 2.7.1.12)
uxaP-uxaQ-uxaM-gnd-uxaR-uxaE-uxuB2-gntE-gntK -88 6.4 TAAAACATCACATATCT Tnap_0217
Thermotoga neapolitana DSM 4359
Position: -33
Score: 6.35322
Sequence: TAAAACATCACATATCT
Locus tag: CTN_0237
Name: uxaP
Funciton: Predicted galacturonate TRAP transporter, substrate binding subunit
Locus tag: CTN_0236
Name: uxaQ
Funciton: Predicted galacturonate TRAP transporter, small permease subunit
Locus tag: CTN_0235
Name: uxaM
Funciton: Predicted galacturonate TRAP transporter, large permease subunit
Locus tag: CTN_0234
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Locus tag: CTN_0233
Name: uxaR
Funciton: Regulator of pectin and galacturonate utilization, GntR family
Locus tag: CTN_0232
Name: uxaE
Funciton: D-tagaturonate epimerase
Locus tag: CTN_0231
Name: uxuB2
Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
Locus tag: CTN_0230
Name: gntE
Funciton: novel D-mannonate-D-gluconate epimerase
Locus tag: CTN_0229
Name: gntK
Funciton: Gluconokinase (EC 2.7.1.12)
uxaP-uxaQ-uxaM-gnd-uxaR-uxaE-uxuB2-gntE-gntK -33 6.4 TAAAACATCACATATCT CTN_0237
Thermotoga petrophila RKU-1
Position: -28
Score: 6.43026
Sequence: TGAAACATCAAACATCT
Locus tag: Tpet_0484
Name: aldH
Funciton: alcohol dehydrogenase, zinc-containing
Locus tag: Tpet_0483
Name: pelB
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: Tpet_0482
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Locus tag: Tpet_0481
Name: uxaR
Funciton: Regulator of pectin and galacturonate utilization, GntR family
Locus tag: Tpet_0480
Name: uxaE
Funciton: D-tagaturonate epimerase
Locus tag: Tpet_0479
Name: uxuB2
Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
Locus tag: Tpet_0478
Name: gntE
Funciton: novel D-mannonate-D-gluconate epimerase
Locus tag: Tpet_0477
Name: gntK
Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK -28 6.4 TGAAACATCAAACATCT Tpet_0484
Thermotoga sp. RQ2
Position: -29
Score: 6.43026
Sequence: TGAAACATCAAACATCT
Locus tag: TRQ2_0499
Name: aldH
Funciton: alcohol dehydrogenase, zinc-containing
Locus tag: TRQ2_0498
Name: pelB
Funciton: Polygalacturonase (EC 3.2.1.15)
Locus tag: TRQ2_0497
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Locus tag: TRQ2_0496
Name: uxaR
Funciton: Regulator of pectin and galacturonate utilization, GntR family
Locus tag: TRQ2_0495
Name: uxaE
Funciton: D-tagaturonate epimerase
Locus tag: TRQ2_0494
Name: uxuB2
Funciton: D-mannonate dehydrogenase (EC 1.1.1.57), NADPH-dependent
Locus tag: TRQ2_0493
Name: gntE
Funciton: novel D-mannonate-D-gluconate epimerase
Locus tag: TRQ2_0492
Name: gntK
Funciton: Gluconokinase (EC 2.7.1.12)
aldH-pelB-gnd-uxaR-uxaE-uxuB2-gntE-gntK -29 6.4 TGAAACATCAAACATCT TRQ2_0499