Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribB gene

Properties
Regulog: RbkR - Methanosarcinales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Euryarchaeota
Built upon 9 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Methanococcoides burtonii DSM 6242
Position: -58
Score: 6.05207
Sequence: CGTCTCATATTTGAGATG
Position: -40
Score: 5.61108
Sequence: CATCTCATATTTGAGGCA
Locus tag: Mbur_1724
Name: rbkR
Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: Mbur_1723
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB -58 6.1 CGTCTCATATTTGAGATG Mbur_1724
-40 5.6 CATCTCATATTTGAGGCA
Methanohalophilus mahii DSM 5219
Position: -29
Score: 5.93117
Sequence: CGTCTCAATTTTGAGATG
Locus tag: Mmah_2024
Name: rbkR
Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: Mmah_2023
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB -29 5.9 CGTCTCAATTTTGAGATG Mmah_2024
Methanosarcina acetivorans C2A
Position: -15
Score: 5.89468
Sequence: CATCTCATTATTGAGATG
Position: 3
Score: 4.98863
Sequence: CGTCTCAAAATTAAGGCA
Locus tag: MA0547
Name: rbkR
Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: MA0548
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB -15 5.9 CATCTCATTATTGAGATG MA0547
3 5 CGTCTCAAAATTAAGGCA
Methanosarcina barkeri str. fusaro
Position: -46
Score: 5.68768
Sequence: CATCTCAGAATTGAGATG
Position: -28
Score: 5.54105
Sequence: CATCTCAAAATTAAGATA
Locus tag: Mbar_A1523
Name: rbkR
Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: Mbar_A1524
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB -46 5.7 CATCTCAGAATTGAGATG Mbar_A1523
-28 5.5 CATCTCAAAATTAAGATA
Methanosarcina mazei Goe1
Position: -51
Score: 5.71494
Sequence: TATCTCATAATTGAGACG
Position: -33
Score: 5.28452
Sequence: CATCTCAAAATTAAGGTA
Locus tag: MM1709
Name: rbkR
Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase
Locus tag: MM1710
Name: ribB
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB -51 5.7 TATCTCATAATTGAGACG MM1709
-33 5.3 CATCTCAAAATTAAGGTA