Orthologous regulated operons containing ribB gene

Properties
Regulog:	RbkR - Halobacteriales
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:
Biological process:	Riboflavin biosynthesis
Effector:	Flavin mononucleotide
Phylum:	Euryarchaeota

Built upon 14 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Haloarcula marismortui ATCC 43049
Position: 197 Score: 4.60907 Sequence: CCGTTCCAAAAGTGGAATGC Position: 215 Score: 5.60095 Sequence: GCATTCCACCTTCGGTATGC Locus tag: rrnAC3074 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: rrnAC3073 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	197	4.6	CCGTTCCAAAAGTGGAATGC	rrnAC3074
	215	5.6	GCATTCCACCTTCGGTATGC
Halobacterium salinarum R1
Position: -49 Score: 5.20499 Sequence: GCATTCCACTTTCGGTATCC Locus tag: OE3964R Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: OE3963R Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-49	5.2	GCATTCCACTTTCGGTATCC	OE3964R
Halobacterium sp. NRC-1
Position: -22 Score: 5.20499 Sequence: GCATTCCACTTTCGGTATCC Locus tag: VNG2126C Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: VNG2125Gm Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-22	5.2	GCATTCCACTTTCGGTATCC	VNG2126C
Haloferax volcanii DS2
Position: -49 Score: 4.92893 Sequence: GCATTCCACTTACGATACGC Locus tag: HVO_0326 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: HVO_0327 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-49	4.9	GCATTCCACTTACGATACGC	HVO_0326
Halomicrobium mukohataei DSM 12286
Position: -49 Score: 5.01222 Sequence: GGATGACACATTCGTTATCC Locus tag: Hmuk_1112 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: Hmuk_1111 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-49	5	GGATGACACATTCGTTATCC	Hmuk_1112
Haloquadratum walsbyi DSM 16790
Position: -49 Score: 4.87723 Sequence: GCATTCCATGTTCGTTATTC Locus tag: HQ3236A Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: HQ3235A Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-49	4.9	GCATTCCATGTTCGTTATTC	HQ3236A
Halorubrum lacusprofundi ATCC 49239
Position: -67 Score: 4.30568 Sequence: GGTTAACGTTTTTGGGATGC Position: -49 Score: 4.88892 Sequence: GCATCTCACATCCGTTACTC Locus tag: Hlac_0355 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: Hlac_0354 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-67	4.3	GGTTAACGTTTTTGGGATGC	Hlac_0355
	-49	4.9	GCATCTCACATCCGTTACTC
Haloterrigena turkmenica DSM 5511
Position: -67 Score: 4.54427 Sequence: CCATCACAGTTTTGGTACGC Position: -49 Score: 6.03131 Sequence: GCATGCCACATTCGGTATGC Locus tag: Htur_2982 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: Htur_2983 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-67	4.5	CCATCACAGTTTTGGTACGC	Htur_2982
	-49	6	GCATGCCACATTCGGTATGC
Natrialba magadii ATCC 43099
Position: -67 Score: 4.39929 Sequence: CCATAACAGTTCTGTGATGC Position: -49 Score: 5.76313 Sequence: GCGTACCACATTCGGTACGC Locus tag: Nmag_0941 Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: Nmag_0942 Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-67	4.4	CCATAACAGTTCTGTGATGC	Nmag_0941
	-49	5.8	GCGTACCACATTCGGTACGC
Natronomonas pharaonis DSM 2160
Position: -49 Score: 5.00593 Sequence: CCATACCACATTCGTTACGG Locus tag: NP0072A Name: rbkR Funciton: DNA-binding HTH domain in riboflavin kinase / CTP-dependent archaeal riboflavin kinase Locus tag: NP0074A Name: ribB Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase
rbkR-ribB	-49	5	CCATACCACATTCGTTACGG	NP0072A

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing ribB gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --