Orthologous regulated operons containing msmR1 gene

Properties
Regulog:	MsmR1 - Bifidobacteriaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Alpha-galactosides utilization
Effector:	Alpha-galactosides
Phylum:	Actinobacteria

Built upon 4 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bifidobacterium breve DSM 20213
Position: -181 Score: 6.17382 Sequence: TTCTGAAACCGGTTTCAGAA Locus tag: BIFBRE_01266 Name: msmR1 Funciton: Transcriptional regulator of alpha-galactoside utilization, LacI family
msmR1	-181	6.2	TTCTGAAACCGGTTTCAGAA	BIFBRE_01266
Bifidobacterium dentium Bd1
Position: -155 Score: 5.18256 Sequence: ACGTGAAAACGTTATCGAAG Position: -55 Score: 5.43079 Sequence: GCTTGATAACGTTATCGGGT Locus tag: BDP_0487 Name: agaL1 Funciton: Alpha-galactosidase 1 (EC:3.2.1.22) Locus tag: BDP_0488 Name: msmE1 Funciton: Multiple sugar ABC transporter, substrate-binding protein Locus tag: BDP_0489 Name: msmF1 Funciton: Multiple sugar ABC transporter, membrane-spanning permease 1 Locus tag: BDP_0491 Name: msmG1 Funciton: Multiple sugar ABC transporter, membrane-spanning permease 2 Locus tag: BDP_0492 Name: msmR1 Funciton: Transcriptional regulator of alpha-galactoside utilization, LacI family
agaL1-msmE1-msmF1-msmG1-msmR1	-155	5.2	ACGTGAAAACGTTATCGAAG	BDP_0487
	-55	5.4	GCTTGATAACGTTATCGGGT
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -210 Score: 6.21543 Sequence: TTTTGAAACCGGTTTCAGAA Locus tag: Blon_1483 Name: msmR1 Funciton: Transcriptional regulator of alpha-galactoside utilization, LacI family
msmR1	-210	6.2	TTTTGAAACCGGTTTCAGAA	Blon_1483

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --