Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing DVU2960 gene

Properties
Regulog: DVU2956 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Delta
Built upon 9 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfomicrobium baculatum DSM 4028
Position: -348
Score: 5.66062
Sequence: CCGGCAATTTCTTGCCGG
Position: -169
Score: 6.15979
Sequence: GCGGCAATATTTTGCCGT
Locus tag: Dbac_2264
Name: null
Funciton: TSUP family protein
Locus tag: Dbac_2265
Name: null
Funciton: hypothetical membrane protein
Locus tag: Dbac_2266
Name: null
Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
Locus tag: Dbac_2267
Name: null
Funciton: hypothetical protein
Locus tag: Dbac_2268
Name: null
Funciton: Signal transduction histidine kinase
Locus tag: Dbac_2269
Name: null
Funciton: response regulator receiver protein
Locus tag: Dbac_2270
Name: null
Funciton: hypothetical protein
Locus tag: Dbac_2271
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: Dbac_2272
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
Dbac_2264-Dbac_2265-Dbac_2266-Dbac_2267-Dbac_2268-Dbac_2269-Dbac_2270-Dbac_2271-Dbac_2272 -348 5.7 CCGGCAATTTCTTGCCGG Dbac_2264
-169 6.2 GCGGCAATATTTTGCCGT
Desulfovibrio magneticus RS-1
Position: -346
Score: 6.41255
Sequence: GCGGCAAAAATTTGCCGC
Position: -220
Score: 6.29425
Sequence: ACGGCAAAAATTTGCCGC
Position: -199
Score: 5.54573
Sequence: GCGGCGAATGTTTGCCGT
Locus tag: DMR_40120
Name: null
Funciton: TSUP family protein
Locus tag: DMR_40110
Name: null
Funciton: hypothetical membrane protein
Locus tag: DMR_40100
Name: null
Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
Locus tag: DMR_40090
Name: null
Funciton: hypothetical protein
Locus tag: DMR_40080
Name: null
Funciton: Signal transduction histidine kinase
Locus tag: DMR_40070
Name: null
Funciton: response regulator receiver protein
Locus tag: DMR_40060
Name: null
Funciton: hypothetical protein
Locus tag: DMR_40050
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: DMR_40040
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
DMR_40120-DMR_40110-DMR_40100-DMR_40090-DMR_40080-DMR_40070-DMR_40060-DMR_40050-DMR_40040 -346 6.4 GCGGCAAAAATTTGCCGC DMR_40120
-220 6.3 ACGGCAAAAATTTGCCGC
-199 5.5 GCGGCGAATGTTTGCCGT
Desulfovibrio vulgaris Hildenborough
Position: -268
Score: 5.83669
Sequence: GCGGTAATTTTTTGCCGC
Locus tag: DVU2958
Name: null
Funciton: TSUP family protein
Locus tag: DVU2959
Name: null
Funciton: hypothetical membrane protein
Locus tag: DVU2960
Name: ntrC
Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
Locus tag: DVU2961
Name: null
Funciton: hypothetical protein
Locus tag: DVU2962
Name: null
Funciton: Signal transduction histidine kinase
Locus tag: DVU2963
Name: null
Funciton: response regulator receiver protein
Locus tag: DVU2964
Name: null
Funciton: hypothetical protein
Locus tag: DVU2965
Name: null
Funciton: hypothetical protein
Locus tag: DVU2966
Name: null
Funciton: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Locus tag: DVU2967
Name: null
Funciton: response regulator receiver sensor signal transduction histidine kinase
DVU2958-DVU2959-ntrC-DVU2961-DVU2962-DVU2963-DVU2964-DVU2965-DVU2966-DVU2967 -268 5.8 GCGGTAATTTTTTGCCGC DVU2958
Desulfovibrio vulgaris str. Miyazaki F
Position: -292
Score: 5.66062
Sequence: CCGGCAATTTGTTGCCGG
Position: -271
Score: 5.44567
Sequence: GCGGAAAATTTCTGCCGT
Locus tag: DvMF_1764
Name: null
Funciton: TSUP family protein
Locus tag: DvMF_1765
Name: null
Funciton: hypothetical membrane protein
Locus tag: DvMF_1766
Name: null
Funciton: PAS modulated sigma54 specific transcriptional regulator, Fis family
Locus tag: DvMF_1767
Name: null
Funciton: hypothetical protein
Locus tag: DvMF_1768
Name: null
Funciton: Signal transduction histidine kinase
Locus tag: DvMF_1769
Name: null
Funciton: response regulator receiver protein
Locus tag: DvMF_1770
Name: null
Funciton: hypothetical protein
DvMF_1764-DvMF_1765-DvMF_1766-DvMF_1767-DvMF_1768-DvMF_1769-DvMF_1770 -292 5.7 CCGGCAATTTGTTGCCGG DvMF_1764
-271 5.4 GCGGAAAATTTCTGCCGT