Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG2516 gene

Properties
Regulog: YrdX - Burkholderia
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Built upon 7 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia phymatum STM815
Position: -127
Score: 7.00343
Sequence: ATTGATCG-(3)-GTTGATTG
Position: -90
Score: 5.37315
Sequence: TTGGCATA-(3)-GTTGCGTT
Locus tag: Bphy_4560
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Bphy_4561
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Bphy_4562
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Bphy_4563
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: Bphy_4564
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Bphy_4565
Name: COG438 (RfaG)
Funciton: Glycosyltransferase
Locus tag: Bphy_4566
Name: Bphy_4566
Funciton: NAD/NADP transhydrogenase alpha subunit
Locus tag: Bphy_4567
Name: COG2072 (TrkA)
Funciton: FAD dependent oxidoreductase
PF02635-COG388-COG2516-COG3153-COG2144-COG438 (RfaG)-Bphy_4566-COG2072 (TrkA) -127 7 ATTGATCG-(3)-GTTGATTG Bphy_4560
-90 5.4 TTGGCATA-(3)-GTTGCGTT
Burkholderia vietnamiensis G4
Position: -123
Score: 5.86705
Sequence: AATGATTG-(3)-AATGATCG
Position: -86
Score: 5.37315
Sequence: TTGGCATA-(3)-GTTGCGTT
Locus tag: Bcep1808_6051
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Bcep1808_6052
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Bcep1808_6053
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Bcep1808_6054
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: Bcep1808_6055
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
PF02635-COG388-COG2516-COG3153-COG2144 -123 5.9 AATGATTG-(3)-AATGATCG Bcep1808_6051
-86 5.4 TTGGCATA-(3)-GTTGCGTT
Burkholderia xenovorans LB400
Position: -331
Score: 5.99755
Sequence: GTTGAAAA-(3)-GTTGATCG
Position: -121
Score: 7.07738
Sequence: ATTGATTG-(3)-ATTGATCG
Position: -84
Score: 6.18858
Sequence: ATGGCACG-(3)-GTTGCATT
Locus tag: Bxe_A1407
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Bxe_A1408
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Bxe_A1409
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Bxe_A1410
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: Bxe_A1411
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Bxe_A1412
Name: COG438 (RfaG)
Funciton: Glycosyltransferase
PF02635-COG388-COG2516-COG3153-COG2144-COG438 (RfaG) -331 6 GTTGAAAA-(3)-GTTGATCG Bxe_A1407
-121 7.1 ATTGATTG-(3)-ATTGATCG
-84 6.2 ATGGCACG-(3)-GTTGCATT