Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing udh gene

Properties
Regulog: GguR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Glucuronate utilization; Glucarate utilization; Galacturonate utilization; Galactarate utilization
Effector:
Phylum: Proteobacteria/Gamma
Built upon 25 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas mendocina ymp
Position: -316
Score: 4.75711
Sequence: ACGTTGTCATACAACTT
Position: -60
Score: 5.01958
Sequence: AAGTCATACGACAACGT
Locus tag: Pmen_3299
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: Pmen_3300
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: Pmen_3301
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: Pmen_3302
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: Pmen_3303
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: Pmen_3304
Name: PF00892
Funciton: Drug/metabolite transporter
udh-uxuL-uxuP-uxuQ-uxuM-PF00892 -316 4.8 ACGTTGTCATACAACTT Pmen_3299
-60 5 AAGTCATACGACAACGT
Pseudomonas putida KT2440
Position: -43
Score: 5.11119
Sequence: AAGTCATACGACAACCT
Locus tag: PP1171
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: PP1170
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: PP1169
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: PP_1168
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: PP1167
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: PP1166
Name: PF00892
Funciton: Drug/metabolite transporter
Locus tag: PP1165
Name: aldE
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
udh-uxuL-uxuP-uxuQ-uxuM-PF00892-aldE -43 5.1 AAGTCATACGACAACCT PP1171
Pseudomonas syringae pv. tomato str. DC3000
Position: -48
Score: 5.07441
Sequence: AAGTCATACGACAACAG
Locus tag: PSPTO1053
Name: udh
Funciton: Uronate dehydrogenase (EC 1.1.1.203)
Locus tag: PSPTO1052
Name: uxuL
Funciton: Predicted glucuronolactone/galactarolactone lactonase
Locus tag: PSPTO1051
Name: uxuP
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
Locus tag: PSPTO1050
Name: uxuQ
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
Locus tag: PSPTO1049
Name: uxuM
Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
Locus tag: PSPTO1048
Name: PF00892
Funciton: Drug/metabolite transporter
Locus tag: PSPTO1047
Name: aldE
Funciton: Aldose 1-epimerase (EC 5.1.3.3)
udh-uxuL-uxuP-uxuQ-uxuM-PF00892-aldE -48 5.1 AAGTCATACGACAACAG PSPTO1053