Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pepD gene

Properties
Regulog: TyrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Amino acid utilization
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Built upon 312 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -123
Score: 4.36728
Sequence: CTGGAAACTTTGGCTTCCAC
Locus tag: Sama_2519
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -123 4.4 CTGGAAACTTTGGCTTCCAC Sama_2519
Shewanella baltica OS155
Position: -123
Score: 4.00814
Sequence: CTGGAAACTTTGGCTGCCAG
Locus tag: Sbal_0940
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -123 4 CTGGAAACTTTGGCTGCCAG Sbal_0940
Shewanella halifaxensis HAW-EB4
Position: -160
Score: 4.58306
Sequence: GTGGAAACTTTGCCTGACAA
Locus tag: Shal_3175
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -160 4.6 GTGGAAACTTTGCCTGACAA Shal_3175
Shewanella loihica PV-4
Position: -123
Score: 4.5857
Sequence: GTGGCAACTTAGTATGACAC
Locus tag: Shew_2852
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -123 4.6 GTGGCAACTTAGTATGACAC Shew_2852
Shewanella pealeana ATCC 700345
Position: -141
Score: 4.50367
Sequence: GTGGAAACTTTGGCTGACAA
Locus tag: Spea_3091
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -141 4.5 GTGGAAACTTTGGCTGACAA Spea_3091
Shewanella piezotolerans WP3
Position: -140
Score: 4.01319
Sequence: ATGGCAACTTCTGCTGACAC
Locus tag: swp_1180
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -140 4 ATGGCAACTTCTGCTGACAC swp_1180
Shewanella putrefaciens CN-32
Position: -108
Score: 3.87028
Sequence: CTGGCAACTTTGGCTGCCAG
Locus tag: Sputcn32_0954
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -108 3.9 CTGGCAACTTTGGCTGCCAG Sputcn32_0954
Shewanella sp W3-18-1
Position: -108
Score: 3.87028
Sequence: CTGGCAACTTTGGCTGCCAG
Locus tag: Sputw3181_3222
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -108 3.9 CTGGCAACTTTGGCTGCCAG Sputw3181_3222
Shewanella woodyi ATCC 51908
Position: -180
Score: 3.83475
Sequence: TTGGCAACTTTCAATGACAG
Locus tag: Swoo_3603
Name: pepD
Funciton: Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3)
pepD -180 3.8 TTGGCAACTTTCAATGACAG Swoo_3603
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