Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pep3 gene

Properties
Regulog: TyrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator
Biological process: Amino acid utilization
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Built upon 312 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella baltica OS155
Position: -173
Score: 3.99379
Sequence: CTGGTAACCTTTAGTTACAT
Locus tag: Sbal_0685
Name: pep3
Funciton: peptidase, M13 family
pep3 -173 4 CTGGTAACCTTTAGTTACAT Sbal_0685
Shewanella denitrificans OS217
Position: -224
Score: 3.78381
Sequence: TTGGTTACATAAATTGCCAG
Locus tag: Sden_1089
Name: pep3
Funciton: peptidase, M13 family
pep3 -224 3.8 TTGGTTACATAAATTGCCAG Sden_1089
Shewanella halifaxensis HAW-EB4
Position: -202
Score: 3.85714
Sequence: TAGGAAACCTTTTCTTACAC
Locus tag: Shal_3258
Name: pep3
Funciton: peptidase, M13 family
pep3 -202 3.9 TAGGAAACCTTTTCTTACAC Shal_3258
Shewanella loihica PV-4
Position: -180
Score: 4.11541
Sequence: GAGGAAATCTTTACTTACAT
Locus tag: Shew_2973
Name: pep3
Funciton: peptidase, M13 family
pep3 -180 4.1 GAGGAAATCTTTACTTACAT Shew_2973
Shewanella oneidensis MR-1
Position: -173
Score: 4.18411
Sequence: ATGGTAATTTTTAGTTACAA
Locus tag: SO_3844
Name: pep3
Funciton: peptidase, M13 family
pep3 -173 4.2 ATGGTAATTTTTAGTTACAA SO_3844
Shewanella pealeana ATCC 700345
Position: -237
Score: 3.76572
Sequence: TGGGAAACCTTTTCTTACAC
Locus tag: Spea_3177
Name: pep3
Funciton: peptidase, M13 family
pep3 -237 3.8 TGGGAAACCTTTTCTTACAC Spea_3177
Shewanella piezotolerans WP3
Position: -189
Score: 3.85714
Sequence: TAGGAAACCTTTTCTTACAC
Locus tag: swp_3866
Name: pep3
Funciton: peptidase, M13 family
pep3 -189 3.9 TAGGAAACCTTTTCTTACAC swp_3866
Shewanella putrefaciens CN-32
Position: -276
Score: 3.6298
Sequence: ATGTTAAGTTTATTTGCCTT
Locus tag: Sputcn32_0791
Name: pep3
Funciton: peptidase, M13 family
pep3 -276 3.6 ATGTTAAGTTTATTTGCCTT Sputcn32_0791
Shewanella sediminis HAW-EB3
Position: -218
Score: 4.03602
Sequence: AAGGAAACCTTTACTTACAC
Locus tag: Ssed_3509
Name: pep3
Funciton: peptidase, M13 family
pep3 -218 4 AAGGAAACCTTTACTTACAC Ssed_3509
Shewanella sp ANA-3
Position: -172
Score: 4.18411
Sequence: ATGGTAATTTTTAGTTACAA
Locus tag: Shewana3_0759
Name: pep3
Funciton: peptidase, M13 family
pep3 -172 4.2 ATGGTAATTTTTAGTTACAA Shewana3_0759
Shewanella sp MR-4
Position: -173
Score: 4.18411
Sequence: ATGGTAATTTTTAGTTACAA
Locus tag: Shewmr4_3179
Name: pep3
Funciton: peptidase, M13 family
pep3 -173 4.2 ATGGTAATTTTTAGTTACAA Shewmr4_3179
Shewanella sp MR-7
Position: -172
Score: 4.18411
Sequence: ATGGTAATTTTTAGTTACAA
Locus tag: Shewmr7_0787
Name: pep3
Funciton: peptidase, M13 family
pep3 -172 4.2 ATGGTAATTTTTAGTTACAA Shewmr7_0787
Shewanella sp W3-18-1
Position: -276
Score: 3.6298
Sequence: ATGTTAAGTTTATTTGCCTT
Locus tag: Sputw3181_3384
Name: pep3
Funciton: peptidase, M13 family
pep3 -276 3.6 ATGTTAAGTTTATTTGCCTT Sputw3181_3384
Shewanella woodyi ATCC 51908
Position: -178
Score: 3.71963
Sequence: AAGGAAACCTTTTCTTACAT
Locus tag: Swoo_0911
Name: pep3
Funciton: peptidase, M13 family
pep3 -178 3.7 AAGGAAACCTTTTCTTACAT Swoo_0911
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