Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmB2 gene

Properties
Regulog: Zur - Nocardiaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Nocardia farcinica IFM 10152
Position: -95
Score: 5.44225
Sequence: TTTCGATAACGATTGTCATTT
Position: -40
Score: 5.69589
Sequence: TGTCGAAAACGATTGTCATCA
Locus tag: nfa49750
Name: rpmB2
Funciton: LSU ribosomal protein L28p
Locus tag: nfa49760
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: nfa49770
Name: rpsN2
Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: nfa49780
Name: rpsR2
Funciton: SSU ribosomal protein S18p
rpmB2-rpmG2-rpsN2-rpsR2 -95 5.4 TTTCGATAACGATTGTCATTT nfa49750
-40 5.7 TGTCGAAAACGATTGTCATCA
Rhodococcus erythropolis PR4
Position: -95
Score: 5.05097
Sequence: TTCTGGGAATGATTGTCATTA
Position: -41
Score: 5.47748
Sequence: TGTCGAAAACGATTGTCATCT
Locus tag: RER_44030
Name: rpmB2
Funciton: LSU ribosomal protein L28p
Locus tag: RER_44040
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: RER_44050
Name: rpsN2
Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: RER_44060
Name: rpsR2
Funciton: SSU ribosomal protein S18p
rpmB2-rpmG2-rpsN2-rpsR2 -95 5.1 TTCTGGGAATGATTGTCATTA RER_44030
-41 5.5 TGTCGAAAACGATTGTCATCT
Rhodococcus opacus B4
Position: -116
Score: 5.66066
Sequence: TTTCGATAACGATTGTCATTA
Position: -62
Score: 5.76118
Sequence: TGTCGAAAATGATTGTCATCA
Locus tag: ROP_56810
Name: rpmB2
Funciton: LSU ribosomal protein L28p
Locus tag: ROP_56800
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: ROP_56790
Name: rpsN2
Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: ROP_56780
Name: rpsR2
Funciton: SSU ribosomal protein S18p
rpmB2-rpmG2-rpsN2-rpsR2 -116 5.7 TTTCGATAACGATTGTCATTA ROP_56810
-62 5.8 TGTCGAAAATGATTGTCATCA
Rhodococcus sp. RHA1
Position: -117
Score: 5.66066
Sequence: TTTCGATAACGATTGTCATTA
Position: -63
Score: 5.76118
Sequence: TGTCGAAAATGATTGTCATCA
Locus tag: RHA1_ro05617
Name: rpmB2
Funciton: LSU ribosomal protein L28p
Locus tag: RHA1_ro05616
Name: rpmG2
Funciton: LSU ribosomal protein L33p
Locus tag: RHA1_ro05615
Name: rpsN2
Funciton: SSU ribosomal protein S14p (S29e)
Locus tag: RHA1_ro05614
Name: rpsR2
Funciton: SSU ribosomal protein S18p
rpmB2-rpmG2-rpsN2-rpsR2 -117 5.7 TTTCGATAACGATTGTCATTA RHA1_ro05617
-63 5.8 TGTCGAAAATGATTGTCATCA