Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpmF2 gene

Properties
Regulog: Zur - Nocardiaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Actinobacteria
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Nocardia farcinica IFM 10152
Position: -88
Score: 5.69589
Sequence: TGATGACAATCGTTTTCGACA
Position: -33
Score: 5.44225
Sequence: AAATGACAATCGTTATCGAAA
Locus tag: nfa49740
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: nfa49730
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: nfa49720
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -88 5.7 TGATGACAATCGTTTTCGACA nfa49740
-33 5.4 AAATGACAATCGTTATCGAAA
Rhodococcus erythropolis PR4
Position: -84
Score: 5.47748
Sequence: AGATGACAATCGTTTTCGACA
Position: -30
Score: 5.05097
Sequence: TAATGACAATCATTCCCAGAA
Locus tag: RER_44020
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: RER_44010
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: RER_44000
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -84 5.5 AGATGACAATCGTTTTCGACA RER_44020
-30 5.1 TAATGACAATCATTCCCAGAA
Rhodococcus opacus B4
Position: -30
Score: 5.81741
Sequence: TAACGACAATCGTTTTCAATA
Locus tag: ROP_04730
Name: rpmJ2
Funciton: LSU ribosomal protein L36
Locus tag: ROP_04720
Name: rpmF2
Funciton: LSU ribosomal protein L32p
rpmJ2-rpmF2 -30 5.8 TAACGACAATCGTTTTCAATA ROP_04730
Rhodococcus sp. RHA1
Position: -83
Score: 5.76118
Sequence: TGATGACAATCATTTTCGACA
Position: -29
Score: 5.66066
Sequence: TAATGACAATCGTTATCGAAA
Locus tag: RHA1_ro05618
Name: yciC
Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: RHA1_ro05619
Name: rpmE2
Funciton: LSU ribosomal protein L31p
Locus tag: RHA1_ro05620
Name: rpmF2
Funciton: LSU ribosomal protein L32p
yciC-rpmE2-rpmF2 -83 5.8 TGATGACAATCATTTTCGACA RHA1_ro05618
-29 5.7 TAATGACAATCGTTATCGAAA