Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaE gene

Properties
Regulog: PaaR - Frankineae/Propionibacterineae/Pseudonocardiaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Actinobacteria
Built upon 14 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidothermus cellulolyticus 11B
Position: -41
Score: 5.70798
Sequence: GTCAACCGAACATTCGGTCGGT
Locus tag: Acel_1443
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Acel_1442
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Acel_1441
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Acel_1440
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Acel_1439
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE -41 5.7 GTCAACCGAACATTCGGTCGGT Acel_1443
Nakamurella multipartita DSM 44233
Position: -70
Score: 5.64783
Sequence: TCTTACTGACCGTTCGGTCAGT
Position: -66
Score: 4.98581
Sequence: ACTGACCGTTCGGTCAGTTACA
Locus tag: Namu_2491
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Namu_2490
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Namu_2489
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Namu_2488
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Namu_2487
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Namu_2486
Name: null
Funciton: hypothetical protein
Locus tag: Namu_2485
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
paaA-paaB-paaC-paaD-paaE-Namu_2486-paaZ -70 5.6 TCTTACTGACCGTTCGGTCAGT Namu_2491
-66 5 ACTGACCGTTCGGTCAGTTACA
Saccharomonospora viridis DSM 43017
Position: -39
Score: 5.34266
Sequence: ACTTCCTGAACGTTCGGTTGGT
Locus tag: Svir_26540
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Svir_26530
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Svir_26520
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Svir_26510
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Svir_26500
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Svir_26490
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaZ-paaA-paaB-paaC-paaD-paaE -39 5.3 ACTTCCTGAACGTTCGGTTGGT Svir_26540
Saccharopolyspora erythraea NRRL 2338
Position: -186
Score: 5.46792
Sequence: ACTGACCGAGTAGTCGGTTATT
Position: -52
Score: 5.45253
Sequence: CGTTACCGAACGAACGGTCGGT
Position: -48
Score: 5.4452
Sequence: ACCGAACGAACGGTCGGTAAAA
Locus tag: SACE_3543
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: SACE_3544
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: SACE_3545
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: SACE_3546
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: SACE_3547
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: SACE_3548
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaZ-paaA-paaB-paaC-paaD-paaE -186 5.5 ACTGACCGAGTAGTCGGTTATT SACE_3543
-52 5.5 CGTTACCGAACGAACGGTCGGT
-48 5.4 ACCGAACGAACGGTCGGTAAAA